Gene
RNA
| Item | Value |
|---|---|
| gene id | G5986 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 7552349 ~ 7553098 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU7454 | True | 677 | lncRNA | 0.51 | 2 | 7552349 | 7553098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528450 | LOC106574163 | coding | upstream | 1955 | 7414613 ~ 7550394 (+) |
| LOC118966183 | NA | coding | upstream | 221307 | 7330452 ~ 7331042 (+) |
| ankle1 | LOC106574192 | coding | upstream | 444840 | 7096299 ~ 7107509 (+) |
| alpi.2 | LOC106574193 | coding | upstream | 458129 | 7064368 ~ 7094220 (+) |
| alpi.1 | LOC106574189 | coding | upstream | 495831 | 7028550 ~ 7056518 (+) |
| LOC110528753 | LOC106574165 | coding | downstream | 188464 | 7741562 ~ 7839951 (+) |
| LOC110528839 | LOC106574168 | coding | downstream | 287582 | 7840680 ~ 7882886 (+) |
| LOC110528925 | hykk | coding | downstream | 347663 | 7900761 ~ 7935217 (+) |
| LOC118966768 | NA | coding | downstream | 399695 | 7952793 ~ 7952888 (+) |
| nmur1a | LOC106574171 | coding | downstream | 495897 | 8048995 ~ 8085970 (+) |
| G5943 | NA | non-coding | upstream | 267755 | 7283664 ~ 7284594 (+) |
| G5904 | NA | non-coding | upstream | 357932 | 7192444 ~ 7194417 (+) |
| G5892 | NA | non-coding | upstream | 376077 | 7175802 ~ 7176272 (+) |
| G5883 | NA | non-coding | upstream | 392078 | 7159121 ~ 7160271 (+) |
| G5882 | NA | non-coding | upstream | 393928 | 7158156 ~ 7158421 (+) |
| G6426 | NA | non-coding | downstream | 143182 | 7696280 ~ 7696531 (+) |
| G6435 | NA | non-coding | downstream | 165810 | 7718908 ~ 7720218 (+) |
| G6445 | NA | non-coding | downstream | 186527 | 7739625 ~ 7739824 (+) |
| G6501 | NA | non-coding | downstream | 291747 | 7844845 ~ 7845416 (+) |
| G5581 | NA | other | upstream | 740728 | 6810994 ~ 6811621 (+) |
| G5276 | NA | other | upstream | 1034160 | 6517482 ~ 6518189 (+) |
| G3597 | NA | other | upstream | 2695284 | 4856525 ~ 4857065 (+) |
| G3596 | NA | other | upstream | 2696101 | 4854521 ~ 4856248 (+) |
| G3351 | NA | other | upstream | 3110441 | 4439966 ~ 4441908 (+) |
| G6434 | NA | other | downstream | 171948 | 7725046 ~ 7725609 (+) |
| G6518 | NA | other | downstream | 332293 | 7885391 ~ 7885907 (+) |
| G6807 | NA | other | downstream | 483519 | 8036617 ~ 8037154 (+) |
| LOC110501328 | LOC106574178 | other | downstream | 676199 | 8229189 ~ 8231566 (+) |
| LOC110505168 | LOC106574179 | other | downstream | 702044 | 8255142 ~ 8271732 (+) |
