G6692



Basic Information


Item Value
gene id G6692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7865031 ~ 7865623 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU8250
ctccaggtgtgtgtgtgtgtgtgtgtgtctaacctgttgAGGAACTTCTCAGTGAGGTTATGCTGGGCATCTGGCCCCTCCTGTGTGTGAACCCCTCCCTCCAGCAGCATCTGCTGGTACAGctgtctctgctgctgcttcTGTTCCAGGTGCTGCTGGACACGCTTCTTCTGCCTGTAGTACTCCTGGATCTGCTCACCGTCGTGCTGTCGAGGAAGACACACACGCATTTAGAACGATAGACGAATATAGTACACCAAGAACGAAACAAAACCATTATGTCAGGTCATGACGTTACCTCCAAAACACGCGGCAAACTACAGTACAGCCCTCTCAGCAAGGCCTCGAAGCTAATCCACATCAAACACACAACGGG

Function


NR:

description
WD repeat-containing protein 47-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU8250 True 376 lncRNA 0.39 2 7865031 7865623

Neighbor


gene id symbol gene type direction distance location
ddx59 ddx59 coding downstream 125842 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 139579 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1085152 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 1104483 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 1116900 6748011 ~ 6748131 (-)
dynlt2b tctex1d2 coding upstream 274545 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 311658 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 409015 8274638 ~ 8341087 (-)
LOC110529747 tsc22d2 coding upstream 506970 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 630302 8495925 ~ 8580590 (-)
G6688 NA non-coding downstream 9615 7854433 ~ 7855416 (-)
G6657 LOC106574165 non-coding downstream 25106 7805505 ~ 7839925 (-)
G6674 NA non-coding downstream 30836 7833873 ~ 7834195 (-)
G6659 NA non-coding downstream 57532 7806838 ~ 7807499 (-)
G6653 NA non-coding downstream 75349 7789210 ~ 7789682 (-)
G6705 NA non-coding upstream 17728 7883351 ~ 7883581 (-)
G6707 NA non-coding upstream 19639 7885262 ~ 7885976 (-)
G6726 NA non-coding upstream 61131 7926754 ~ 7929828 (-)
G6728 hykk non-coding upstream 67530 7933153 ~ 7935186 (-)
G6762 NA non-coding upstream 120864 7986487 ~ 7987051 (-)
G6347 NA other downstream 347210 7514111 ~ 7517821 (-)
G5487 NA other downstream 1114995 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 1313685 6537498 ~ 6551510 (-)
G4804 NA other downstream 1846955 6016822 ~ 6018076 (-)
G6706 NA other upstream 18720 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 173556 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 298653 8164276 ~ 8183933 (-)
G7985 NA other upstream 1287647 9153270 ~ 9153947 (-)

Expression



Co-expression Network