G6518


Basic Information

Item Value
gene id G6518
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7885391 ~ 7885907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8049
gattaggtccctatatctctctctgtttctgttcctgtccttgtcggattcttgtttgttgtgtttcatgcctgagccagactatcgtcatgtttgctgtaaccttgtcctgtcctgtcggaatctgccggtctatctgagcctacctatgtttggttattaaagaagctctgtttaagttagttcgcttttgggtcctcattcactccccataacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgggatccagggagcgatgctaggcagacacgagcaggaagtgtctgctgctcgacatgccgttgagaccctggccacccaagtctccaacctcacagaacaggttcaccatctccgcctcgatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgctcgttcctcacccagtgtgatattgtgttttctc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8049 True 517 TUCP 0.41 1 7885391 7885907

Neighbor

gene id symbol gene type direction distance location
LOC110528839 LOC106574168 coding upstream 2505 7840680 ~ 7882886 (+)
LOC110528753 LOC106574165 coding upstream 45457 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 334997 7414613 ~ 7550394 (+)
LOC118966183 NA coding upstream 554349 7330452 ~ 7331042 (+)
ankle1 LOC106574192 coding upstream 777882 7096299 ~ 7107509 (+)
LOC110528925 hykk coding downstream 14854 7900761 ~ 7935217 (+)
LOC118966768 NA coding downstream 66886 7952793 ~ 7952888 (+)
nmur1a LOC106574171 coding downstream 163088 8048995 ~ 8085970 (+)
LOC110529397 LOC106574172 coding downstream 266166 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 296330 8117910 ~ 8197019 (+)
G6501 NA non-coding upstream 39975 7844845 ~ 7845416 (+)
G6445 NA non-coding upstream 145567 7739625 ~ 7739824 (+)
G6435 NA non-coding upstream 165173 7718908 ~ 7720218 (+)
G6426 NA non-coding upstream 188860 7696280 ~ 7696531 (+)
G6522 NA non-coding downstream 7848 7893755 ~ 7894244 (+)
G6526 NA non-coding downstream 11888 7897795 ~ 7898103 (+)
G6497 NA non-coding downstream 17630 7903537 ~ 7905319 (+)
G6803 NA non-coding downstream 147577 8033484 ~ 8033732 (+)
G6812 NA non-coding downstream 155128 8041035 ~ 8041418 (+)
G6434 NA other upstream 159782 7725046 ~ 7725609 (+)
G5581 NA other upstream 1073770 6810994 ~ 6811621 (+)
G5276 NA other upstream 1367202 6517482 ~ 6518189 (+)
G3597 NA other upstream 3028326 4856525 ~ 4857065 (+)
G3596 NA other upstream 3029143 4854521 ~ 4856248 (+)
G6807 NA other downstream 150710 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 343390 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 369235 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1573041 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 2097868 9980527 ~ 9991542 (+)

Expression


Co-expression Network