G6726


Basic Information

Item Value
gene id G6726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7926754 ~ 7929828 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8299
tggcttactgcatttgcgtaacaggaagtctccttgtggagtgcaaggagagagaggcaggtcgttattgcgttggactagttaactgtaaggttgcaagtttggatccccgagctgacaaggtgaaaatctgtcgttctgcccctgaacgaggcagttaaccccaccgtttctaggccgtcattgaaaataagaatgtgttattaactgacttgccaagtcaaatacagattaaataaaaggtgtaaacaattacaattttaaaaattgaaaaaaaaaattgccgtccagaaataccgatttccgattgttatgaaaacttgaaatcggccctaattaatcgtccaacCTCTAGTAATAATACTCAGACTCCTCAACATTAAAATGCAGTGTAACTGGTATGATTTCAGTTTGACCTCTTATTGAAGGTTTCCCCAGGTCTGATTCTCTAGTGATGCAGTATTGAAGGTTTCCCCAGGTCTGATTCTCTAGtgctgcagtattgaaggtttcCCCAGGTCTGATTCTCTAGTGCCGCAGTATTGAAGGTTTCCCCCTCAGGTCTGATTCTCTAGTGATGCAGTATTGAAGGTTTCCCCAGTTCTGATTCTCTAGTGCCGCAGTATTGAAGGTTTCCCCCTCAGGTCTGATTCTCTAGTCATGCAGTATTGAAGGTTTCCCCCTCAGGTCTGATTCTCTAGTCATGCAGTATTGTTATTCATATTTCCAGACACTGAATGTAACTTTTACACCAGGCGAAAAAAACTCAAATTGCTGGACGGCCAAGTGTCTGTATGCAAGTTTTCACTCCTCCCTTATTCTTGAAAGATCAATTAGGGTCACTGATTAGTTATGAACTACCCTAACCTGGTTGTCTGGGTCTTAAATTGGACAAATTCACAGGATATAAAGCAGacacgattacaagcatacccctaacatgatgcagccaccactatgcttgaaaatatggagtggtactcagtaatgtgttggatttggccacaaacataacactttgaattcaggacaaaaagtgaattgttttGCCACActtcttgcagtattactttagtgccttgttgcgaacaggatgcatgttgtggaaaaatggcattctctacaggcttccttctttcccctatgtcatttaggttagtattgtggagtaactataatgttgttgatccatcctcagttctctcctatcacagacattaaattcagtaactgttttaaagtcggcattggcctcatggtgaaatccctgagcggtttccttcctctccggcaactgagttaggaaggacgcgtGTATCTTtgagtgactgggtgtattgatacaccctgcaaagtgtaattaataatttcaccatgctcaaagggatgtgtaatgtctgctttaaaaaaataaataaaaataggtgTCCTTTGCGAAGCAttggtctttgtgtttgaaattcactgctcgactatgGGACTTCAAAACATaattttatgtgtggggtacagagatgaggtagtaatttaaaaataatgttaaaactattattgcacacagagtgagtccatgtaaacTACGtgacttaagcacatttttactcaacTTATTTTGCTTGCCGTAACAAACGTgttgaatatttaaaatgactcaagagatttcagcttttcattaattagtaaacatttcaaaaaacattattccactttgatggggtagtgtgtgtaggctagtgacaaaaatatataaatgtaatacattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8299 True 1763 lncRNA 0.36 2 7926754 7929828

Neighbor

gene id symbol gene type direction distance location
ddx59 ddx59 coding downstream 187565 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 201302 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1146875 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 1166206 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 1178623 6748011 ~ 6748131 (-)
dynlt2b tctex1d2 coding upstream 210340 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 247453 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 344810 8274638 ~ 8341087 (-)
LOC110529747 tsc22d2 coding upstream 442765 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 566097 8495925 ~ 8580590 (-)
G6707 NA non-coding downstream 40778 7885262 ~ 7885976 (-)
G6705 NA non-coding downstream 43173 7883351 ~ 7883581 (-)
G6692 NA non-coding downstream 61131 7865031 ~ 7865623 (-)
G6688 NA non-coding downstream 71338 7854433 ~ 7855416 (-)
G6674 NA non-coding downstream 92559 7833873 ~ 7834195 (-)
G6728 hykk non-coding upstream 3325 7933153 ~ 7935186 (-)
G6762 NA non-coding upstream 56659 7986487 ~ 7987051 (-)
G6780 NA non-coding upstream 82945 8012773 ~ 8013003 (-)
G6806 NA non-coding upstream 106432 8036260 ~ 8036564 (-)
G6808 NA non-coding upstream 106984 8036812 ~ 8037118 (-)
G6706 NA other downstream 41754 7884343 ~ 7885000 (-)
G6347 NA other downstream 408933 7514111 ~ 7517821 (-)
G5487 NA other downstream 1176718 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 1375408 6537498 ~ 6551510 (-)
G6810 LOC107579696 other upstream 109351 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 234448 8164276 ~ 8183933 (-)
G7985 NA other upstream 1223442 9153270 ~ 9153947 (-)
G7965 NA other upstream 1251627 9181455 ~ 9194911 (-)

Expression


Co-expression Network