G6881



Basic Information


Item Value
gene id G6881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8095615 ~ 8095959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU8482
agactacactcaatcatatgacccactgaagagatgagtcttcagtaaggacttaaaggttgagaccgagtttgcgtctctgacatgggtaggcagaccgttccataaaaatggagctctataggagaaagccctgcctccagctgtttgcttagaaattctagagacaattaggaggcctgcgtcttgtgaccgtagcgtacgtgtaggtatgtacggcaggaccaaatcagagagataggtaggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgctttgacaggaagccagtgtagggaggctagcactggagtaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU8482 True 345 lncRNA 0.56 1 8095615 8095959

Neighbor


gene id symbol gene type direction distance location
ddx59 ddx59 coding downstream 356426 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 370163 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1315736 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 1335067 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 1347484 6748011 ~ 6748131 (-)
dynlt2b tctex1d2 coding upstream 44209 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 81322 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 178679 8274638 ~ 8341087 (-)
LOC110529747 tsc22d2 coding upstream 276634 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 399966 8495925 ~ 8580590 (-)
G6875 NA non-coding downstream 7046 8088131 ~ 8088569 (-)
G6872 NA non-coding downstream 13320 8082068 ~ 8082295 (-)
G6865 NA non-coding downstream 23741 8070836 ~ 8071874 (-)
G6863 NA non-coding downstream 27293 8067675 ~ 8068322 (-)
G6860 LOC106574171 non-coding downstream 33228 8062046 ~ 8062387 (-)
G7189 NA non-coding upstream 48021 8143980 ~ 8144381 (-)
G7211 NA non-coding upstream 98790 8194749 ~ 8225628 (-)
G7213 LOC106574176 non-coding upstream 101167 8197126 ~ 8231786 (-)
G7238 NA non-coding upstream 144917 8240876 ~ 8241121 (-)
G7241 NA non-coding upstream 147363 8243322 ~ 8249204 (-)
G6810 LOC107579696 other downstream 56152 8039179 ~ 8039463 (-)
G6706 NA other downstream 210615 7884343 ~ 7885000 (-)
G6347 NA other downstream 577794 7514111 ~ 7517821 (-)
G5487 NA other downstream 1345579 6740509 ~ 6750036 (-)
G7184 LOC100135997 other upstream 68317 8164276 ~ 8183933 (-)
G7985 NA other upstream 1057311 9153270 ~ 9153947 (-)
G7965 NA other upstream 1085496 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 1471982 9567941 ~ 9590586 (-)

Expression



Co-expression Network