Gene
RNA
| Item | Value |
|---|---|
| gene id | G6912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8145046 ~ 8147477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tctex1 domain-containing protein 2 isoform X2 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU8532 | True | 896 | lncRNA | 0.44 | 2 | 8145046 | 8147477 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nmur1a | LOC106574171 | coding | upstream | 59076 | 8048995 ~ 8085970 (+) |
| LOC118966768 | NA | coding | upstream | 192158 | 7952793 ~ 7952888 (+) |
| LOC110528925 | hykk | coding | upstream | 209829 | 7900761 ~ 7935217 (+) |
| LOC110528839 | LOC106574168 | coding | upstream | 262160 | 7840680 ~ 7882886 (+) |
| LOC110528753 | LOC106574165 | coding | upstream | 305112 | 7741562 ~ 7839951 (+) |
| LOC110529397 | LOC106574172 | coding | downstream | 4596 | 8152073 ~ 8162387 (+) |
| LOC100135997 | LOC100135997 | coding | downstream | 34760 | 8117910 ~ 8197019 (+) |
| LOC110529481 | LOC106574173 | coding | downstream | 40452 | 8187929 ~ 8191228 (+) |
| LOC110529566 | LOC106574176 | coding | downstream | 45205 | 8192682 ~ 8199666 (+) |
| LOC110497697 | LOC106574176 | coding | downstream | 61856 | 8209333 ~ 8213887 (+) |
| G6821 | NA | non-coding | upstream | 57301 | 8086029 ~ 8087745 (+) |
| G6844 | NA | non-coding | upstream | 68448 | 8076370 ~ 8076598 (+) |
| G6838 | NA | non-coding | upstream | 76784 | 8067935 ~ 8068262 (+) |
| G6812 | NA | non-coding | upstream | 103628 | 8041035 ~ 8041418 (+) |
| G6946 | LOC106574176 | non-coding | downstream | 61985 | 8209462 ~ 8225068 (+) |
| G6964 | NA | non-coding | downstream | 92958 | 8240435 ~ 8240724 (+) |
| G6967 | NA | non-coding | downstream | 95806 | 8243283 ~ 8249184 (+) |
| G6969 | NA | non-coding | downstream | 104985 | 8252462 ~ 8252670 (+) |
| G6978 | NA | non-coding | downstream | 116173 | 8263650 ~ 8263921 (+) |
| G6807 | NA | other | upstream | 107892 | 8036617 ~ 8037154 (+) |
| G6518 | NA | other | upstream | 259139 | 7885391 ~ 7885907 (+) |
| G6434 | NA | other | upstream | 419437 | 7725046 ~ 7725609 (+) |
| G5581 | NA | other | upstream | 1333425 | 6810994 ~ 6811621 (+) |
| G5276 | NA | other | upstream | 1626857 | 6517482 ~ 6518189 (+) |
| LOC110501328 | LOC106574178 | other | downstream | 81820 | 8229189 ~ 8231566 (+) |
| LOC110505168 | LOC106574179 | other | downstream | 107665 | 8255142 ~ 8271732 (+) |
| LOC118966784 | LOC106574127 | other | downstream | 1311471 | 9450932 ~ 9460358 (+) |
| LOC110510920 | LOC106574155 | other | downstream | 1836298 | 9980527 ~ 9991542 (+) |
| gipc3 | LOC106574151 | other | downstream | 1993767 | 10140230 ~ 10162948 (+) |
