G7184 (LOC100135997)


Basic Information

Item Value
gene id G7184
gene name LOC100135997
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8164276 ~ 8183933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8825
acacacacacacactgaacattaTAAAAATGTTGTCACGTTTTGCACACTAAGATCTGTGTAAAGTCCCACAAATATTTGTAATCCATGCAAATGTGCTTCTAAAGCAATGTTGCCTTGCTTGTATGCATTTGCATTGTAGACAGTCGTCTCTGCACCATAAAGGTCATCATCACCTGACACATGGGATATGATTTGTACACCTGTTGAGAAGTAATTCCTTCAACTCTTTTTAAAGTGTAAGAGATTATTGCAAAAGAATGCATATAATGGAAACTACTTTCTCAATCAACTATCAacttttgtataaaaaaaaacaagtacatttcGTCTGGATGAAATGGTGGACAATTCAGTTAAtgccttctccccccccccccccccccccatccatcctTGATTCAGAGGATATCGTTTTCGCAGCTTCATCAGGAAATACAATTATCTTTACAGTATTATATCCAGTTCGACATCCAACTCTCCTCAAAATTGTTCATTGATTATACAATACATTTAGGAGTTAAACATTTCCCAGATGTTTCTATATTTTTCATTCTGTTTCTTTTGTGGTCACCTGTCTGCAGATGCCATGTTTACAGGCTTCACAATGGGCAGCCTCATGGGGTCCATCACTCCTCCCTTCCAAATGGAATGGGTTATTATTTTCGCCTGCGTCCTTATAGTAGCACTTGACGAGGATCTTCACAACAAGCTTCTCCAGCAGAACCTCAATGTTCTCTGTCTTAAAATGAGGCTCCTCCATTGTACTCTGTACACACTTCTTGCACTCCTGTCTGTAGCGTTTCACTTTAACCATCCCCTTGTCCTCCAACAGACGCATGTGAAACACCACCAGAACTCTTTTCGAAGGCCAGGTCCTCTTACACTTTGAGCACATGAACCTGCAAATGCCCCACTGATGTACTGCTGCCAACCTCTCGCTGGGTGATCAGGAATGATGGCGCTATCAAATTCAATGCTCCAGGTGTCCTCTATGTCATGCTCCTCAATCGTGTTCTGGAGAATGCTGGCCCATTCCTGAAGATCCATTGCTTCTGAGCAGGGGAAGTAGCAGGTTTCCAAAACGGACAGTTTAGCTGTAGCTTTTCGAAACGTATGTCTGTCCagcccggacttgaaccagatcaaacatctctggagagacctgaaatagctgtgcagctatgctcccaatccaacctgacagagtttgacaGGATCTGCCAaaaaataatgggagaaactgcccaaatacaggtgtgccaagcttgcagagtcatacccaagaagaattgaggctgtaatcgctgccaaaggcgcttcaacaaagtactgagtgaagggtctgaatactttccgaaggcactgtag
>TU8827
acacacacacacactgaacattaTAAAAATGTTGTCACGTTTTGCACACTAAGATCTGTGTAAAGTCCCACAAATATTTGTAATCCATGCAAATGTGCTTCTAAAGCAATGTTGCCTTGCTTGTATGCATTTGCATTGTAGACAGTCGTCTCTGCACCATAAAGGTCATCATCACCTGACACATGGGATATGATTTGTACACTGTCTGCAGATGCCATGTTTACAGGCTTCACAATGGGCAGCCTCATGGGGTCCATCACTCCTCCCTTCCAAATGGAATGGGTTATTATTTTCGCCTGCGTCCTTATAGTAGCACTTGACGAGGATCTTCACAACAAGCTTCTCCAGCAGAACCTCAATGTTCTCTGTCTTAAAATGAGGCTCCTCCATTGTACTCTGTACACACTTCTTGCACTCCTGTCTGTAGCGTTTCACTTTAACCATCCCCTTGTCCTCCAACAGACGCATGTGAAACACCACCAGAACTCTTTTCGAAGGCCAGGTCCTCTTACACTTTGAGCACATGAACTTGCAAATGCCCCACTGATGTACTGCTGCCAACCTCTCGCTGGGTGATCAGGAATGATGGCGCTATCAAATTCAATGCTCCAGGTGTCCTCTATGTCATGCTCCTCAATCGTGTTCTGGAGAATGCTGGCCCATTCCTGAAGATCCATTGCTTCTGAGCAGGGGAAGTAGCAGGTTTCCAAAACGGACAGTTTAGCTGTAGCTTTTCGAAACGTATGTCTGTCCGTGAGATTTTGTCTACTCACTGGGTTTTATATATGCTATCTA

Function

NR:

description
Receptor-transporting protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8825 False 1370 TUCP 0.44 3 8164276 8183933
TU8827 True 795 TUCP 0.44 3 8182308 8183933

Neighbor

gene id symbol gene type direction distance location
dynlt2b tctex1d2 coding downstream 16773 8140168 ~ 8147503 (-)
ddx59 ddx59 coding downstream 425087 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 438824 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1384397 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 1403728 6757914 ~ 6760548 (-)
LOC110529671 rubcn coding upstream 90705 8274638 ~ 8341087 (-)
LOC110529747 tsc22d2 coding upstream 188660 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 311992 8495925 ~ 8580590 (-)
LOC110530501 LOC106574127 coding upstream 434847 8618780 ~ 8666735 (-)
LOC118966038 LOC106574155 coding upstream 460063 8643996 ~ 8648869 (-)
G7189 NA non-coding downstream 19895 8143980 ~ 8144381 (-)
G6881 NA non-coding downstream 68317 8095615 ~ 8095959 (-)
G6875 NA non-coding downstream 75707 8088131 ~ 8088569 (-)
G6872 NA non-coding downstream 81981 8082068 ~ 8082295 (-)
G6865 NA non-coding downstream 92402 8070836 ~ 8071874 (-)
G7211 NA non-coding upstream 10816 8194749 ~ 8225628 (-)
G7213 LOC106574176 non-coding upstream 13193 8197126 ~ 8231786 (-)
G7238 NA non-coding upstream 56943 8240876 ~ 8241121 (-)
G7241 NA non-coding upstream 59389 8243322 ~ 8249204 (-)
G7250 NA non-coding upstream 75394 8259327 ~ 8259527 (-)
G6810 LOC107579696 other downstream 124813 8039179 ~ 8039463 (-)
G6706 NA other downstream 279276 7884343 ~ 7885000 (-)
G6347 NA other downstream 646455 7514111 ~ 7517821 (-)
G5487 NA other downstream 1414240 6740509 ~ 6750036 (-)
G7985 NA other upstream 969337 9153270 ~ 9153947 (-)
G7965 NA other upstream 997522 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 1384008 9567941 ~ 9590586 (-)
G10263 NA other upstream 3378804 11562737 ~ 11563125 (-)

Expression


Co-expression Network