G6964


Basic Information

Item Value
gene id G6964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8240435 ~ 8240724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8586
CTATCATATGAAAAAGTAGCAAGTCTTCATCATTCAAACAAGATTCTAATAATGATATCTACAATATGCAAGAACCCCATTAGTTGGTAAAATGAAAGACTTTTCACTGAAGATGATCAGATATTTGACCTCATTTACCAGATTCTCGTATCCagaacaacatactgtagagagtgaATACATTTTCAtcctggtcccccgtgggaattgaacccacaactctGGTGTTGAAAGtgccatgttctactaactgaggaACACAGGACCATAACAAAACCACAATATAAAGC

Function

NR:

description
cholesteryl ester transfer protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8586 True 290 lncRNA 0.46 1 8240435 8240724

Neighbor

gene id symbol gene type direction distance location
LOC110501328 LOC106574178 coding upstream 8869 8229189 ~ 8231566 (+)
LOC118943893 LOC106574176 coding upstream 15168 8224365 ~ 8225267 (+)
LOC110497697 LOC106574176 coding upstream 26548 8209333 ~ 8213887 (+)
LOC110529566 LOC106574176 coding upstream 40769 8192682 ~ 8199666 (+)
LOC110529481 LOC106574173 coding upstream 49207 8187929 ~ 8191228 (+)
LOC110505168 LOC106574179 coding downstream 15149 8255142 ~ 8271732 (+)
LOC110529807 pfn2 coding downstream 245930 8486654 ~ 8494344 (+)
LOC110515166 ankub1 coding downstream 362001 8602725 ~ 8612667 (+)
LOC110532690 NA coding downstream 384162 8624886 ~ 8634174 (+)
LOC110519734 ankub1 coding downstream 426445 8667169 ~ 8693760 (+)
G6946 LOC106574176 non-coding upstream 15367 8209462 ~ 8225068 (+)
LOC100135997 LOC100135997 non-coding upstream 43416 8117910 ~ 8197019 (+)
G6912 NA non-coding upstream 92958 8145046 ~ 8147477 (+)
G6821 NA non-coding upstream 152690 8086029 ~ 8087745 (+)
G6844 NA non-coding upstream 163837 8076370 ~ 8076598 (+)
G6967 NA non-coding downstream 2559 8243283 ~ 8249184 (+)
G6969 NA non-coding downstream 11738 8252462 ~ 8252670 (+)
G6978 NA non-coding downstream 22926 8263650 ~ 8263921 (+)
G6983 NA non-coding downstream 32212 8272936 ~ 8274241 (+)
G6985 NA non-coding downstream 33942 8274666 ~ 8275427 (+)
G6807 NA other upstream 203281 8036617 ~ 8037154 (+)
G6518 NA other upstream 354528 7885391 ~ 7885907 (+)
G6434 NA other upstream 514826 7725046 ~ 7725609 (+)
G5581 NA other upstream 1428814 6810994 ~ 6811621 (+)
LOC118966784 LOC106574127 other downstream 1218224 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1743051 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1900520 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 3235940 11433102 ~ 11514427 (+)

Expression


Co-expression Network