G7238



Basic Information


Item Value
gene id G7238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8240876 ~ 8241121 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU8910
aatgtaattttccatctctcacagttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtgggaaaccctgcaaaattggcagtgtatcaaatacttgttctccccactgtacattgaTGGATTTAATGGTATGTCTCCTCAGGTGAACTAGTTGAAAGGgataccatgctgtcctactACTCCTTACCACACCCAGGATGCCGTAGAGAGTGAAGTACATGCTGATGTTGG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU8910 True 246 lncRNA 0.52 1 8240876 8241121

Neighbor


gene id symbol gene type direction distance location
LOC118965595 NA coding downstream 58745 8177281 ~ 8182131 (-)
dynlt2b tctex1d2 coding downstream 93373 8140168 ~ 8147503 (-)
ddx59 ddx59 coding downstream 501687 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 515424 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1460997 6774389 ~ 6779879 (-)
LOC110529671 rubcn coding upstream 33517 8274638 ~ 8341087 (-)
LOC110529747 tsc22d2 coding upstream 131472 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 254804 8495925 ~ 8580590 (-)
LOC110530501 LOC106574127 coding upstream 377659 8618780 ~ 8666735 (-)
LOC118966038 LOC106574155 coding upstream 402875 8643996 ~ 8648869 (-)
G7213 LOC106574176 non-coding downstream 9090 8197126 ~ 8231786 (-)
G7211 NA non-coding downstream 15248 8194749 ~ 8225628 (-)
G7189 NA non-coding downstream 96495 8143980 ~ 8144381 (-)
G6881 NA non-coding downstream 144917 8095615 ~ 8095959 (-)
G6875 NA non-coding downstream 152307 8088131 ~ 8088569 (-)
G7241 NA non-coding upstream 2201 8243322 ~ 8249204 (-)
G7250 NA non-coding upstream 18206 8259327 ~ 8259527 (-)
G7214 NA non-coding upstream 31803 8272924 ~ 8300709 (-)
G7303 NA non-coding upstream 180453 8421574 ~ 8421860 (-)
G7184 LOC100135997 other downstream 56943 8164276 ~ 8183933 (-)
G6810 LOC107579696 other downstream 201413 8039179 ~ 8039463 (-)
G6706 NA other downstream 355876 7884343 ~ 7885000 (-)
G6347 NA other downstream 723055 7514111 ~ 7517821 (-)
G7985 NA other upstream 912149 9153270 ~ 9153947 (-)
G7965 NA other upstream 940334 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 1326820 9567941 ~ 9590586 (-)
G10263 NA other upstream 3321616 11562737 ~ 11563125 (-)

Expression



Co-expression Network