G6969


Basic Information

Item Value
gene id G6969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8252462 ~ 8252670 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8594
ttcatctgaccagagcaccttcttccacgtttggtgtgcctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctctggacagagtctcccacctcagctgtagatctctgcagttcatcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8594 True 209 lncRNA 0.50 1 8252462 8252670

Neighbor

gene id symbol gene type direction distance location
LOC110501328 LOC106574178 coding upstream 20896 8229189 ~ 8231566 (+)
LOC118943893 LOC106574176 coding upstream 27195 8224365 ~ 8225267 (+)
LOC110497697 LOC106574176 coding upstream 38575 8209333 ~ 8213887 (+)
LOC110529566 LOC106574176 coding upstream 52796 8192682 ~ 8199666 (+)
LOC110529481 LOC106574173 coding upstream 61234 8187929 ~ 8191228 (+)
LOC110505168 LOC106574179 coding downstream 3203 8255142 ~ 8271732 (+)
LOC110529807 pfn2 coding downstream 233984 8486654 ~ 8494344 (+)
LOC110515166 ankub1 coding downstream 350055 8602725 ~ 8612667 (+)
LOC110532690 NA coding downstream 372216 8624886 ~ 8634174 (+)
LOC110519734 ankub1 coding downstream 414499 8667169 ~ 8693760 (+)
G6967 NA non-coding upstream 3278 8243283 ~ 8249184 (+)
G6964 NA non-coding upstream 11738 8240435 ~ 8240724 (+)
G6946 LOC106574176 non-coding upstream 27394 8209462 ~ 8225068 (+)
LOC100135997 LOC100135997 non-coding upstream 55443 8117910 ~ 8197019 (+)
G6912 NA non-coding upstream 104985 8145046 ~ 8147477 (+)
G6978 NA non-coding downstream 10980 8263650 ~ 8263921 (+)
G6983 NA non-coding downstream 20266 8272936 ~ 8274241 (+)
G6985 NA non-coding downstream 21996 8274666 ~ 8275427 (+)
G7001 NA non-coding downstream 53095 8305765 ~ 8306401 (+)
G7009 tsc22d2 non-coding downstream 118504 8371174 ~ 8373438 (+)
G6807 NA other upstream 215308 8036617 ~ 8037154 (+)
G6518 NA other upstream 366555 7885391 ~ 7885907 (+)
G6434 NA other upstream 526853 7725046 ~ 7725609 (+)
G5581 NA other upstream 1440841 6810994 ~ 6811621 (+)
LOC118966784 LOC106574127 other downstream 1206278 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1731105 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1888574 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 3223994 11433102 ~ 11514427 (+)

Expression


Co-expression Network