G7214


Basic Information

Item Value
gene id G7214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8272924 ~ 8300709 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8873
tgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactttgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgagagagagaggggggtgtgtgtgtgtgaggggtatgtgtgtgtgtgggtctgtacTGTGTGGGTCTGTACTGTGGGTCTGTACTGTGTGGGTCTGTACCTGCTGAAAAGCACCAGCCTAATTGGACACTTAatgtttctgtttttgtgtcaAATATGaagtgtgtttttgttgttgatttataTCAATTTAATTGCACTGGTCTGTCGGGTTGGGGGGAGGGGTGTTGGTGATGTTTATCTCACACAAAGCATATAGGGCTTTACAGGTTATAGTACCGTTCTGACTTCAGCCTCGTACGACCATCTTCATCTTGTTGCTACATGGATTCATCTTGGGCCTCTTGGGCCGAGGTCCAATATTCCTGAAGGGCTTTACTGTCTTTCATGGTTTTGCTGTATTCAGAGTGTCTGTTCGGTTTCCCCACAGCGTGTTAATCCATCATCCCAAGTTTCACCATTTTGAATGTTTATGACGACTGATGGAAAGAATATATAGAACGGTTGTGTTTGAGGTTCGGGATCAAATCTGTTTGGTTTTCTGTTGGTCGCTCTGGTTAGTGATGTTGTGTCTTGGGGTGGGGAGTGTGCTCATTCACAAGGCGATTGGTAACACACGACATTTTGCTCTGGTTTTCCTGCCAGATTAAGCCTCTGACTAAGAAGCTTTTAGGACGGAGAATTTCCTTTTAGactttgtgtgtctgtgggaaACTAGCCCATATATAACACGGCTACATATATACAGACTGGCATGCCTGCTGTAGAAAAAAAACTAACTCCAGAACAGCATAGTTGGCCCTCATAAGACTCATAATTCAATGTTCCCTTCCCGACAGATATTCGTGTATAGTCTATTGCCAACCAGGGGAGTATAACCTTGTTCATCTAACATTTTAACAAGCCTGCTTTAAATAGAAACGCTATTGATATAATCGTCGCCCGGAAGGTGTCTGGGCCCGTgttcagtccccccccccccccccccagtccatatagtaGTATCCATTATGATctgaaaggcaaaactgatcctagatcagcacttctactccgAGACACATTGTGAATACAGGACCTGATCTCCAGTTGATTTTACTGATGGCCTCCCCGATCCAAGCAGACTCCCGTCCTTATTAAATAAAACACTGTTTTTACTGATGGCCTCCCCAATCCAAGCAGACTCCCGTCCTTATTAAATAtaacactgttttttttttacgtgtAGGGTGCTGTGGAGCTTTAAGTAAACTACTGGAAGAAAATGCTATTGTTTGTGTTTTATGTACTGTTATATAATTCAAATATGATGACAATTAAAGACTGGTCAGACTG
>TU8878
tgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactttgtgtgtgtgtgtgtgtgactctttgtgtgtgtgtgtgtgtgactctgtgtgtgtgtgtgactctgtgtgtgtgtgactgtgtgtgactttgtgtgtgtgtgtgtgtgtgtgtgtgactctgtgtgtgtaggggtgtgtgtgtgtgtgtgtgtgtgtgagagagagaggggggtgtgtgtgtgtgaggggtatgtgtgtgtgtgggtctgtacTGTGTGGGTCTGTACTGTGGGTCTGTACTGTGTGGGTCTGTACCTGCTGAAAAGCACCAGCCTAATTGGACACTTAatgtttctgtttttgtgtcaAATATGaagtgtgtttttgttgttgatttataTCAATTTAATTGCACTGGTCTGTCGGGTTGGGGGGAGGGGTGTTGGTGATGTTTATCTCACACAAAGCATATAGGGCTTTACAGGTTATAGTACCGTTCTGACTTCAGCCTCGTACGACCATCTTCATCTTGTTGCTACATGGATTCATCTTGGGCCTCTTGGGCCGAGGTCCAATATTCCTGAAGGGCTTTACTGTCTTTCATGGTTTTGCTGTATTCAGAGTGTCTGTTCGGTTTCCCCACAGCGTGTTAATCCATCATCCCAAGTTTCACCATTTTGAATGTTTATGACGACTGATGGAAAGAATATATAGAACGGTTGTGTTTGAGGTTCGGGATCAAATCTGTTTGGTTTTCTGTTGGTCGCTCTGGTTAGTGATGTTGTGTCTTGGGGTGGGGAGTGTGCTCATTCACAAGGCGATTGGTAACACACGACATTTTGCTCTGGTTTTCCTGCCAGATTAAGCCTCTGACTAAGAAGCTTTTAGGACGGAGAATTTCCTTTTAGactttgtgtgtctgtgggaaACTAGCCCATATATAACACGGCTACATATATACAGACTGGCATGCCTGCTGTAGAAAAAAAACTAACTCCAGAACAGCATAGTTGGCCCTCATAAGACTCATAATTCAATGTTCCCTTCCCGACAGATATTCGTGTATAGTCTATTGCCAACCAGGGGAGTATAACCTTGTTCATCTAACATTTTAACAAGCCTGCTTTAAATAGAAACGCTATTGATATAATCGTCGCCCGGAAGGTGTCTGGGCCCGTgttcagtccccccccccccccccccagtccatatagtaGTATCCATTATGATctgaaaggcaaaactgatcctagatcagcacttctactccgAGACACATTGTGAATACAGGACCTGATCTCCAGTTGATTTTACTGATGGCCTCCCCGATCCAAGCAGACTCCCGTCCTTATTAAATAAAACACTGTTTTTACTGATGGCCTCCCCAATCCAAGCAGACTCCCGTCCTTATTAAATAtaacactgttttttttttacgtgtAGGGTGCTGTGGAGCTTTAAGTAAACTACTGGAAGAAAATGCTATTGTTTGTGTTTTATGTACTGTTATATAATTCAAATATGATGACAATTAAAGACTGGTCAGACTG
>TU8879
tgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgagagagagaggggggtgtgtgtgtgtgaggggtatgtgtgtgtgtgggtctgtacTGTGTGGGTCTGTACTGTGGGTCTGTACTGTGTGGGTCTGTACCTGCTGAAAAGCACCAGCCTAATTGGACACTTAatgtttctgtttttgtgtcaAATATGaagtgtgtttttgttgttgatttataTCAATTTAATTGCACTGGTCTGTCGGGTTGGGGGGAGGGGTGTTGGTGATGTTTATCTCACACAAAGCATATAGGGCTTTACAGGTTATAGTACCGTTCTGACTTCAGCCTCGTACGACCATCTTCATCTTGTTGCTACATGGATTCATCTTGGGCCTCTTGGGCCGAGGTCCAATATTCCTGAAGGGCTTTACTGTCTTTCATGGTTTTGCTGTATTCAGAGTGTCTGTTCGGTTTCCCCACAGCGTGTTAATCCATCATCCCAAGTTTCACCATTTTGAATGTTTATGACGACTGATGGAAAGAATATATAGAACGGTTGTGTTTGAGGTTCGGGATCAAATCTGTTTGGTTTTCTGTTGGTCGCTCTGGTTAGTGATGTTGTGTCTTGGGGTGGGGAGTGTGCTCATTCACAAGGCGATTGGTAACACACGACATTTTGCTCTGGTTTTCCTGCCAGATTAAGCCTCTGACTAAGAAGCTTTTAGGACGGAGAATTTCCTTTTAGactttgtgtgtctgtgggaaACTAGCCCATATATAACACGGCTACATATATACAGACTGGCATGCCTGCTGTAGAAAAAAAACTAACTCCAGAACAGCATAGTTGGCCCTCATAAGACTCATAATTCAATGTTCCCTTCCCGACAGATATTCGTGTATAGTCTATTGCCAACCAGGGGAGTATAACCTTGTTCATCTAACATTTTAACAAGCCTGCTTTAAATAGAAACGCTATTGATATAATCGTCGCCCGGAAGGTGTCTGGGCCCGTgttcagtccccccccccccccccccagtccatatagtaGTATCCATTATGATctgaaaggcaaaactgatcctagatcagcacttctactccgAGACACATTGTGAATACAGGACCTGATCTCCAGTTGATTTTACTGATGGCCTCCCCGATCCAAGCAGACTCCCGTCCTTATTAAATAAAACACTGTTTTTACTGATGGCCTCCCCAATCCAAGCAGACTCCCGTCCTTATTAAATAtaacactgttttttttttacgtgtAGGGTGCTGTGGAGCTTTAAGTAAACTACTGGAAGAAAATGCTATTGTTTGTGTTTTATGTACTGTTATATAATTCAAATATGATGACAATTAAAGACTGGTCAGACTG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU8873 False 1437 lncRNA 0.35 2 8272924 8300709
TU8878 False 1557 lncRNA 0.42 2 8272924 8300709
TU8879 True 1419 lncRNA 0.37 2 8272924 8300709

Neighbor

gene id symbol gene type direction distance location
LOC118965595 NA coding downstream 90793 8177281 ~ 8182131 (-)
dynlt2b tctex1d2 coding downstream 125421 8140168 ~ 8147503 (-)
ddx59 ddx59 coding downstream 533735 7729593 ~ 7739189 (-)
LOC110531419 LOC106574164 coding downstream 547472 7704811 ~ 7727531 (-)
LOC110528129 nppc coding downstream 1493045 6774389 ~ 6779879 (-)
LOC110529747 tsc22d2 coding upstream 71884 8330314 ~ 8419050 (-)
LOC110508833 rnf13 coding upstream 195216 8495925 ~ 8580590 (-)
LOC110530501 LOC106574127 coding upstream 318071 8618780 ~ 8666735 (-)
LOC118966038 LOC106574155 coding upstream 343287 8643996 ~ 8648869 (-)
LOC110515173 LOC106574127 coding upstream 356930 8657639 ~ 8665971 (-)
G7250 NA non-coding downstream 13397 8259327 ~ 8259527 (-)
G7241 NA non-coding downstream 23720 8243322 ~ 8249204 (-)
G7238 NA non-coding downstream 31803 8240876 ~ 8241121 (-)
G7213 LOC106574176 non-coding downstream 41138 8197126 ~ 8231786 (-)
G7211 NA non-coding downstream 47296 8194749 ~ 8225628 (-)
G7303 NA non-coding upstream 120865 8421574 ~ 8421860 (-)
G7310 NA non-coding upstream 129802 8430511 ~ 8430715 (-)
G7321 NA non-coding upstream 138558 8439267 ~ 8439554 (-)
G7325 NA non-coding upstream 142435 8443144 ~ 8443343 (-)
G7184 LOC100135997 other downstream 88991 8164276 ~ 8183933 (-)
G6810 LOC107579696 other downstream 233461 8039179 ~ 8039463 (-)
G6706 NA other downstream 387924 7884343 ~ 7885000 (-)
G6347 NA other downstream 755103 7514111 ~ 7517821 (-)
G7985 NA other upstream 852561 9153270 ~ 9153947 (-)
G7965 NA other upstream 880746 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 1267232 9567941 ~ 9590586 (-)
G10263 NA other upstream 3262028 11562737 ~ 11563125 (-)

Expression


Co-expression Network