G7081


Basic Information

Item Value
gene id G7081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8443832 ~ 8444041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU8711
attcactgccttctaagcaacttcagtgtatatttgaccttgtgttttaggttattgtcatgctgaaaggtgaattaatctcacAGTGTTGGTCAGAAAGCCGAcaaaaccaggttttcctctaggattttgtgcttagctctctcctgtttcttttttttatcctgaaaaactccccagtccttaatgattacaagcatacccatagca

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8711 True 210 lncRNA 0.44 1 8443832 8444041

Neighbor

gene id symbol gene type direction distance location
LOC110505168 LOC106574179 coding upstream 172100 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 coding upstream 212266 8229189 ~ 8231566 (+)
LOC118943893 LOC106574176 coding upstream 218565 8224365 ~ 8225267 (+)
LOC110497697 LOC106574176 coding upstream 229945 8209333 ~ 8213887 (+)
LOC110529566 LOC106574176 coding upstream 244166 8192682 ~ 8199666 (+)
LOC110529807 pfn2 coding downstream 42613 8486654 ~ 8494344 (+)
LOC110515166 ankub1 coding downstream 158684 8602725 ~ 8612667 (+)
LOC110532690 NA coding downstream 180845 8624886 ~ 8634174 (+)
LOC110519734 ankub1 coding downstream 223128 8667169 ~ 8693760 (+)
LOC118936489 ankub1 coding downstream 277529 8721570 ~ 8747704 (+)
G7073 NA non-coding upstream 11127 8432464 ~ 8432705 (+)
G7072 NA non-coding upstream 11455 8431954 ~ 8432377 (+)
G7066 NA non-coding upstream 17388 8426233 ~ 8426444 (+)
G7009 tsc22d2 non-coding upstream 70394 8371174 ~ 8373438 (+)
G7001 NA non-coding upstream 137431 8305765 ~ 8306401 (+)
G7085 NA non-coding downstream 2314 8446355 ~ 8446991 (+)
G7089 NA non-coding downstream 24664 8468705 ~ 8469121 (+)
G7091 NA non-coding downstream 30804 8474845 ~ 8475081 (+)
G7092 NA non-coding downstream 31323 8475364 ~ 8475568 (+)
G7047 NA non-coding downstream 51694 8495735 ~ 8495841 (+)
G6807 NA other upstream 406678 8036617 ~ 8037154 (+)
G6518 NA other upstream 557925 7885391 ~ 7885907 (+)
G6434 NA other upstream 718223 7725046 ~ 7725609 (+)
LOC118966784 LOC106574127 other downstream 1014907 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1539734 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1697203 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 3032623 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4794572 13238613 ~ 13295452 (+)

Expression


Co-expression Network