Gene
RNA
| Item | Value |
|---|---|
| gene id | G7506 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8698111 ~ 8723332 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 5,6-dihydroxyindole-2-carboxylic acid oxidase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU9224 | False | 242 | lncRNA | 0.45 | 3 | 8698111 | 8723332 |
| TU9222 | True | 416 | lncRNA | 0.51 | 2 | 8722894 | 8723332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515722 | LOC106574127 | coding | downstream | 13594 | 8658353 ~ 8707910 (-) |
| LOC110515173 | LOC106574127 | coding | downstream | 32140 | 8657639 ~ 8665971 (-) |
| LOC118966038 | LOC106574155 | coding | downstream | 49242 | 8643996 ~ 8648869 (-) |
| LOC110530501 | LOC106574127 | coding | downstream | 73091 | 8618780 ~ 8666735 (-) |
| LOC110508833 | rnf13 | coding | downstream | 117521 | 8495925 ~ 8580590 (-) |
| LOC110514907 | LOC106574127 | coding | upstream | 3203 | 8726535 ~ 8734329 (-) |
| LOC118966070 | LOC106574127 | coding | upstream | 28105 | 8751437 ~ 8761523 (-) |
| LOC118966096 | LOC106574127 | coding | upstream | 79757 | 8803089 ~ 8822710 (-) |
| LOC110529913 | LOC106574127 | coding | upstream | 88254 | 8811586 ~ 8824606 (-) |
| LOC118966084 | LOC106574127 | coding | upstream | 111390 | 8834722 ~ 8843050 (-) |
| G7476 | LOC106574155 | non-coding | downstream | 79874 | 8617941 ~ 8618237 (-) |
| G7393 | NA | non-coding | downstream | 84567 | 8613140 ~ 8613544 (-) |
| G7392 | NA | non-coding | downstream | 85025 | 8611962 ~ 8613086 (-) |
| G7531 | NA | non-coding | upstream | 50593 | 8773925 ~ 8781132 (-) |
| G7537 | LOC106574127 | non-coding | upstream | 62356 | 8785688 ~ 8786160 (-) |
| G7538 | NA | non-coding | upstream | 65532 | 8788864 ~ 8789484 (-) |
| G7539 | NA | non-coding | upstream | 70636 | 8793968 ~ 8800158 (-) |
| G7546 | LOC106574127 | non-coding | upstream | 82649 | 8805981 ~ 8820383 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 322547 | 8330314 ~ 8419050 (-) |
| G7184 | LOC100135997 | other | downstream | 514178 | 8164276 ~ 8183933 (-) |
| G6810 | LOC107579696 | other | downstream | 658648 | 8039179 ~ 8039463 (-) |
| G6706 | NA | other | downstream | 813111 | 7884343 ~ 7885000 (-) |
| LOC110531419 | LOC106574164 | other | downstream | 970580 | 7704811 ~ 7727531 (-) |
| G7985 | NA | other | upstream | 429938 | 9153270 ~ 9153947 (-) |
| G7965 | NA | other | upstream | 458123 | 9181455 ~ 9194911 (-) |
| G8455 | LOC106574127 | other | upstream | 844609 | 9567941 ~ 9590586 (-) |
| G10263 | NA | other | upstream | 2839405 | 11562737 ~ 11563125 (-) |
| G10343 | NA | other | upstream | 2921748 | 11645080 ~ 11645703 (-) |
