G7440


Basic Information

Item Value
gene id G7440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8768524 ~ 8797364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9143
cacccagattagtcttcaatttaattttcacccagattagtgttcaatttaatctgcacccagattagtgttcaatttaatctgcacccagattagtgttcaatgtGATAGAACAAAACTCAGTACAGCACATGAATTAGAAAATGTTGTTACAAATTTGTGCCACGAGATGGTGGTATATTATAAGTTTAAATAGCATGGACCTTTGATTTGTCTCTGGATAGAAATTGCCCttgggcacagatctaggatcagtttactctcaccaaatcctaacctttaccattagcagtaaaaacacaaacCAGACCTAAGATTAGTGCAAAGGAGCCACTTCATCTTACCCCTGTAATTATATGACTCCTAActtatatatactgagtgtaccaaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9143 True 394 lncRNA 0.40 2 8768524 8797364

Neighbor

gene id symbol gene type direction distance location
LOC118936489 ankub1 coding upstream 20820 8721570 ~ 8747704 (+)
LOC110519734 ankub1 coding upstream 74764 8667169 ~ 8693760 (+)
LOC110532690 NA coding upstream 134350 8624886 ~ 8634174 (+)
LOC110515166 ankub1 coding upstream 155857 8602725 ~ 8612667 (+)
LOC110529807 pfn2 coding upstream 274180 8486654 ~ 8494344 (+)
LOC118966103 ankub1 coding downstream 2094 8799458 ~ 8851372 (+)
ndufb5 LOC106574141 coding downstream 70746 8868110 ~ 8871284 (+)
usp13 LOC106574137 coding downstream 80227 8877591 ~ 8915400 (+)
LOC110531220 NA coding downstream 374604 9171968 ~ 9183082 (+)
LOC110531147 cssa16h2orf72 coding downstream 421294 9218658 ~ 9221408 (+)
G7414 NA non-coding upstream 476 8711514 ~ 8768048 (+)
G7417 NA non-coding upstream 45300 8722883 ~ 8723224 (+)
G7397 NA non-coding upstream 92509 8620933 ~ 8676015 (+)
G7396 NA non-coding upstream 147600 8620570 ~ 8620924 (+)
G7573 NA non-coding downstream 66817 8864181 ~ 8865177 (+)
G7581 NA non-coding downstream 77417 8874781 ~ 8877527 (+)
G7740 NA non-coding downstream 333240 9130604 ~ 9130845 (+)
G7757 NA non-coding downstream 356174 9153538 ~ 9153843 (+)
LOC110505168 LOC106574179 other upstream 512646 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 538289 8229189 ~ 8231566 (+)
G6807 NA other upstream 731370 8036617 ~ 8037154 (+)
G6518 NA other upstream 882617 7885391 ~ 7885907 (+)
G6434 NA other upstream 1042915 7725046 ~ 7725609 (+)
LOC118966784 LOC106574127 other downstream 661584 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1186411 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1343880 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2679300 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4441249 13238613 ~ 13295452 (+)

Expression


Co-expression Network