G7537 (LOC106574127)


Basic Information

Item Value
gene id G7537
gene name LOC106574127
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8785688 ~ 8786160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9259
ggcaaataattaaataaaaacaattctgcCACGCATCCTGATATGACAACATTTATAACAATATTGTTTTCAGGCAATGGAGGGGGATTCGTGAGGGCATGTTTGACCCGCTGACAAAACAACAGCTTGCCGGCTTGTGTCTGAGGATTGTCCAGTTTTTATCGGACAAGCTGATGCAGATCATCATCCCAGGTCTTTACGAACTACTGGGCATCCAAGATGCTGCCTCCTCTCCATTGTTACAGAGATCTCTCACAGCGTCACTCACCAGTCTGTTAGACGATAAGACTAACACCAAGTCCCGCGTGAGATTTACTGAGGCTGGTGTACCTAAGAGGCCAG

Function

NR:

description
uncharacterized protein LOC110510920

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9259 True 342 lncRNA 0.45 2 8785688 8786160

Neighbor

gene id symbol gene type direction distance location
LOC118966070 LOC106574127 coding downstream 24165 8751437 ~ 8761523 (-)
LOC110514907 LOC106574127 coding downstream 51359 8726535 ~ 8734329 (-)
LOC118965988 LOC106574127 coding downstream 78002 8700047 ~ 8707686 (-)
LOC110515722 LOC106574127 coding downstream 101171 8658353 ~ 8707910 (-)
LOC110515173 LOC106574127 coding downstream 119717 8657639 ~ 8665971 (-)
LOC118966096 LOC106574127 coding upstream 16929 8803089 ~ 8822710 (-)
LOC110529913 LOC106574127 coding upstream 25426 8811586 ~ 8824606 (-)
LOC118966084 LOC106574127 coding upstream 48562 8834722 ~ 8843050 (-)
LOC110514872 LOC106574127 coding upstream 66418 8852578 ~ 8860211 (-)
LOC110531731 LOC106613497 coding upstream 78028 8864188 ~ 8867895 (-)
G7531 NA non-coding downstream 4556 8773925 ~ 8781132 (-)
G7503 NA non-coding downstream 15217 8716200 ~ 8770471 (-)
G7508 NA non-coding downstream 34402 8699394 ~ 8751286 (-)
G7506 NA non-coding downstream 62356 8698111 ~ 8723332 (-)
G7538 NA non-coding upstream 2704 8788864 ~ 8789484 (-)
G7539 NA non-coding upstream 7808 8793968 ~ 8800158 (-)
G7546 LOC106574127 non-coding upstream 19821 8805981 ~ 8820383 (-)
LOC110529747 tsc22d2 other downstream 410124 8330314 ~ 8419050 (-)
G7184 LOC100135997 other downstream 601755 8164276 ~ 8183933 (-)
G6810 LOC107579696 other downstream 746225 8039179 ~ 8039463 (-)
G6706 NA other downstream 900688 7884343 ~ 7885000 (-)
LOC110531419 LOC106574164 other downstream 1058157 7704811 ~ 7727531 (-)
G7985 NA other upstream 367110 9153270 ~ 9153947 (-)
G7965 NA other upstream 395295 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 781781 9567941 ~ 9590586 (-)
G10263 NA other upstream 2776577 11562737 ~ 11563125 (-)
G10343 NA other upstream 2858920 11645080 ~ 11645703 (-)

Expression


Co-expression Network