G7539


Basic Information

Item Value
gene id G7539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8793968 ~ 8800158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9261
TTCACGGAaagatctacacttgttgtattcagcgcatgtgacaaattaaagtTTGAGTTGATTTGACTATGTACCTTCTAAGCATGATGGTTGGCTCATGATTTGTTTGTACTGAAATCTATTCAGGGAGGATAAGGGTATATCATaggcagtgatgtagtggtaaaaccATTGACTGGTAAATGCTGATTGCCGTTCAGGATTAAAGAAGTAACGCTCCCTCTACTTTCAATGCATCTTCCACAAAAGGTGGGTAAATGCttgaacaaaataaaataaaaagtgtgtAAACAGCTTTTACATGtgttcccccccaccaccactgatTATAGGAGGCTTCTTCTGACAGTATTCACACCTTTCATAAGAAACCTCCAGAGAAATATTCATATTCACCGTAGCTGTCATTTAAACTTGGACTAACCTGGCCAAGGCCAAACAGTATATGGCGTTTTCTCTGGGTGTGCGGTCGCAGTGGAGAGAAAAGGCCTCCAGTGAGGTGGTGAGTATCTGGGCGGAGTTTGGCGAGGCAAACACAGGTCTGAGATTGGTGTCTCTGGAAATGGGCGGGAGCGGGACTCTCCTCCTCCATTGGTTGCTGTTCTGATCCCCACTCTCATCCTCCTCACATCCCTTCCCTCCacatcccctcttcttctctctttcatccctcatGGCCACAGGGTGTAGCTTCGGTAGTTGAAGAGGTTTATCCTGGGATGCCAGGGCGCGGAGCGGGCAGGATACATGAGATGGGCAGTTGATGGGGGTCAAACTTCGAGAGGCTGTGGACATCACCCTGATACCCGCCTTGGCCTCACTCCTCCTGGGCTTGGAGGACATCTTGGGGAGGGTGAAGCCGTCCACCAGGACCGTGTCGCCCACCCTGGTCCTGGTCCCTGTTGAGGCCCATGCAGTGCCTGGATGCTtttaagaggctcctctgtcctccactcgttacctgtattaatggcacctgtttgaatgaACTAAATCACCTAATCATacctaatcatactatataatc

Function

NR:

description
protein ANKUB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9261 True 1027 lncRNA 0.53 2 8793968 8800158
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118966070 LOC106574127 coding downstream 32445 8751437 ~ 8761523 (-)
LOC110514907 LOC106574127 coding downstream 59639 8726535 ~ 8734329 (-)
LOC118965988 LOC106574127 coding downstream 86282 8700047 ~ 8707686 (-)
LOC110515722 LOC106574127 coding downstream 109451 8658353 ~ 8707910 (-)
LOC110515173 LOC106574127 coding downstream 127997 8657639 ~ 8665971 (-)
LOC118966096 LOC106574127 coding upstream 2931 8803089 ~ 8822710 (-)
LOC110529913 LOC106574127 coding upstream 11428 8811586 ~ 8824606 (-)
LOC118966084 LOC106574127 coding upstream 34564 8834722 ~ 8843050 (-)
LOC110514872 LOC106574127 coding upstream 52420 8852578 ~ 8860211 (-)
LOC110531731 LOC106613497 coding upstream 64030 8864188 ~ 8867895 (-)
G7538 NA non-coding downstream 4484 8788864 ~ 8789484 (-)
G7537 LOC106574127 non-coding downstream 7808 8785688 ~ 8786160 (-)
G7531 NA non-coding downstream 12836 8773925 ~ 8781132 (-)
G7503 NA non-coding downstream 23497 8716200 ~ 8770471 (-)
G7508 NA non-coding downstream 42682 8699394 ~ 8751286 (-)
G7546 LOC106574127 non-coding upstream 5823 8805981 ~ 8820383 (-)
G7559 NA non-coding upstream 30355 8830513 ~ 8846423 (-)
G7572 NA non-coding upstream 62993 8863151 ~ 8863564 (-)
LOC110529747 tsc22d2 other downstream 418404 8330314 ~ 8419050 (-)
G7184 LOC100135997 other downstream 610035 8164276 ~ 8183933 (-)
G6810 LOC107579696 other downstream 754505 8039179 ~ 8039463 (-)
G6706 NA other downstream 908968 7884343 ~ 7885000 (-)
LOC110531419 LOC106574164 other downstream 1066437 7704811 ~ 7727531 (-)
G7985 NA other upstream 353112 9153270 ~ 9153947 (-)
G7965 NA other upstream 381297 9181455 ~ 9194911 (-)
G8455 LOC106574127 other upstream 767783 9567941 ~ 9590586 (-)
G10263 NA other upstream 2762579 11562737 ~ 11563125 (-)
G10343 NA other upstream 2844922 11645080 ~ 11645703 (-)

Expression

G7539 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G7539 Expression in each Bioproject

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G7539 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
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Co-expression Network