Gene
RNA
| Item | Value |
|---|---|
| gene id | G7546 |
| gene name | LOC106574127 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8805981 ~ 8820383 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110532455 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU9269 | True | 512 | lncRNA | 0.48 | 2 | 8805981 | 8820383 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966070 | LOC106574127 | coding | downstream | 44458 | 8751437 ~ 8761523 (-) |
| LOC110514907 | LOC106574127 | coding | downstream | 71652 | 8726535 ~ 8734329 (-) |
| LOC118965988 | LOC106574127 | coding | downstream | 98295 | 8700047 ~ 8707686 (-) |
| LOC110515722 | LOC106574127 | coding | downstream | 121464 | 8658353 ~ 8707910 (-) |
| LOC110515173 | LOC106574127 | coding | downstream | 140010 | 8657639 ~ 8665971 (-) |
| LOC118966084 | LOC106574127 | coding | upstream | 14339 | 8834722 ~ 8843050 (-) |
| LOC110514872 | LOC106574127 | coding | upstream | 32195 | 8852578 ~ 8860211 (-) |
| LOC110531731 | LOC106613497 | coding | upstream | 43805 | 8864188 ~ 8867895 (-) |
| pex5la | LOC106574138 | coding | upstream | 97485 | 8917868 ~ 9098569 (-) |
| LOC110531326 | NA | coding | upstream | 390113 | 9210496 ~ 9224400 (-) |
| G7539 | NA | non-coding | downstream | 5823 | 8793968 ~ 8800158 (-) |
| G7538 | NA | non-coding | downstream | 16497 | 8788864 ~ 8789484 (-) |
| G7537 | LOC106574127 | non-coding | downstream | 19821 | 8785688 ~ 8786160 (-) |
| G7531 | NA | non-coding | downstream | 24849 | 8773925 ~ 8781132 (-) |
| G7503 | NA | non-coding | downstream | 35510 | 8716200 ~ 8770471 (-) |
| G7559 | NA | non-coding | upstream | 10130 | 8830513 ~ 8846423 (-) |
| G7572 | NA | non-coding | upstream | 42768 | 8863151 ~ 8863564 (-) |
| G7790 | NA | non-coding | upstream | 47729 | 8868112 ~ 8868396 (-) |
| G7788 | LOC106574141 | non-coding | upstream | 48290 | 8868673 ~ 8871275 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 430417 | 8330314 ~ 8419050 (-) |
| G7184 | LOC100135997 | other | downstream | 622048 | 8164276 ~ 8183933 (-) |
| G6810 | LOC107579696 | other | downstream | 766518 | 8039179 ~ 8039463 (-) |
| G6706 | NA | other | downstream | 920981 | 7884343 ~ 7885000 (-) |
| LOC110531419 | LOC106574164 | other | downstream | 1078450 | 7704811 ~ 7727531 (-) |
| G7985 | NA | other | upstream | 332887 | 9153270 ~ 9153947 (-) |
| G7965 | NA | other | upstream | 361072 | 9181455 ~ 9194911 (-) |
| G8455 | LOC106574127 | other | upstream | 747558 | 9567941 ~ 9590586 (-) |
| G10263 | NA | other | upstream | 2742354 | 11562737 ~ 11563125 (-) |
| G10343 | NA | other | upstream | 2824697 | 11645080 ~ 11645703 (-) |
