G8009


Basic Information

Item Value
gene id G8009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9238004 ~ 9238233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9812
GTCTTTCCCAGGTGAAGTTAACCCATCCTTACCTATTGCCCTTTTCATCTCTGCCATGGTAAATGGTGCATTCAATGCATAATTTACATCCTTCCTCCTATCCAGCACTCCAGGGtgctcctctctcattctctctctccccattctctgaAAAAGTTGCTAAGCTATGCACTTTGACAAATGCTTTGGCCATCATCTCTGCCTTCTCCTCATCTGTTACTGCCATATCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106512397

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9812 True 230 lncRNA 0.45 1 9238004 9238233

Neighbor

gene id symbol gene type direction distance location
LOC110531147 cssa16h2orf72 coding upstream 16596 9218658 ~ 9221408 (+)
LOC110531220 NA coding upstream 54922 9171968 ~ 9183082 (+)
usp13 LOC106574137 coding upstream 322604 8877591 ~ 8915400 (+)
ndufb5 LOC106574141 coding upstream 366720 8868110 ~ 8871284 (+)
LOC118966103 ankub1 coding upstream 386632 8799458 ~ 8851372 (+)
psmd1 psmd1 coding downstream 1886 9240119 ~ 9300065 (+)
LOC118966743 LOC106574127 coding downstream 190284 9428517 ~ 9436879 (+)
LOC118966784 LOC106574127 coding downstream 212699 9450932 ~ 9460358 (+)
LOC118966781 LOC106574155 coding downstream 225813 9464046 ~ 9471323 (+)
LOC118936726 LOC106574155 coding downstream 238455 9476688 ~ 9477259 (+)
G8000 NA non-coding upstream 6248 9231526 ~ 9231756 (+)
G7780 NA non-coding upstream 19510 9217219 ~ 9218494 (+)
G7776 NA non-coding upstream 42277 9195355 ~ 9195727 (+)
G7757 NA non-coding upstream 84161 9153538 ~ 9153843 (+)
G7740 NA non-coding upstream 107159 9130604 ~ 9130845 (+)
G8030 NA non-coding downstream 64859 9303092 ~ 9303588 (+)
G8031 NA non-coding downstream 65729 9303962 ~ 9304110 (+)
G8032 NA non-coding downstream 74182 9312415 ~ 9315424 (+)
G8075 NA non-coding downstream 128243 9366476 ~ 9367099 (+)
LOC110510917 LOC106574155 non-coding downstream 244995 9481039 ~ 9483610 (+)
LOC110505168 LOC106574179 other upstream 982126 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1007769 8229189 ~ 8231566 (+)
G6807 NA other upstream 1200850 8036617 ~ 8037154 (+)
G6518 NA other upstream 1352097 7885391 ~ 7885907 (+)
G6434 NA other upstream 1512395 7725046 ~ 7725609 (+)
LOC110510920 LOC106574155 other downstream 745542 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 903011 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2238431 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4000380 13238613 ~ 13295452 (+)

Expression


Co-expression Network