G8032


Basic Information

Item Value
gene id G8032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9312415 ~ 9315424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9838
TTACCAACTGTATTGTATTTAAAGTGCAGGATTTATGTACAAAAATACAGCTGTGTTGGACTCAGCATCCCAAAGAAACGAGAGAACAGAAGAAAGGCACAAACTccggggagagagaaagagtacagGACAaagtgatagacagagagagagagaaagacactgaGACAAGCAATGAGAGAATAAGAGTGCAACAAGTAACTGAGCAGACAGCATCGTTCCATTGGATCCCTTCCCTACAACACATTCATACACTTCAGGTTTGTACACTAACAAAATGTAAAACATTGTCTTTGTAGAAAACACTACTGTATCCCCAACTACTACAACTGTCTGTTGTTGACTTCAAGGTAATAACAGGCAAATATCGCTCACATTGGATTTAAATCATGACAGAAAACGGTACATGAACAGCCAGCCGTATTAAAATCAACTATTCTTCTCGTTACAGGTCCAAGAATCTATGGGTCATTGACTGAATCTACACCGAGTATACAAAatcatgctctttccatgacactgaccaggtgaaagctatgatcccttattgacgtgacttgttaaatccatttcaaatcagtgtagatgaaggcgaagagacgggttaaagaaggatttttaagccttgagacatggattgtgtgccattcagagggtgaatgtgcaagacaaaatatttatgtgcctttgaacgggggggggggggggggggggggtggtatgatagtaggtgccaggcaatgctgctgggttgttcacactcaacagtttcccgtgtgtatcaagaatggttcaccaccaaaggtcatccagccaacttgacaactgtgcattggagtcaacatggtccagcatccctgtggaatgctttcgacaccttgcagagtcTATGCCCtgacgaactgaggctgttctgaggggaaaaggggagcaactcaatattaggaaggtggaaGGTGTTCCAAAAGTTTGGAATACTCAATGACCAAACACTTTTGAAGTGGAGGAACTATATCCAGTAGAACTACATTAAGTCCAAAGAACAGCATGCCCTCCCAGTCACCTCCCTGTCAAACTCTACATTTATATTCCACTCACTCAGAGTGAAGTGGGGGATTTCTAAATGGAGCCCTCCCTCCAGTGGCCACACGAGGTAATTGGACCAGTTATTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTACTCACCCTGTCAGACCCACTACAAACTAGTTGTTTCCTCACCCTGTCAGACCCAATACAAACTAGCCTTAGACTAGACTTTTCAGGAACAGCACTATTGGGCAATCATTAAAATCGCTATATTTAAACTGATATTCAAATCTCCTCGGTGCATCACCACTGGCTGGTGTCAGAGCAAGACTCCATGGTGCATGAGACCACCATGGACATAATGAAACGCGTCTTGCCTCTGAAATGTCCAACTGGCTCAACATACAATAAGATGGCTGACGAGAGACATGGAGTCTCTGGCCCAATCCCACCCCTAAATCCTATGTTTAACATATTGCGTACACCAATAAAATCCTCTCAGATCTTCACATGTGCTTAGGGCTTGGGGATGGATTTGGGATTGGGCCAGCGTGTTCTCTTTCAGCTGATATCCATCCTCTTCGGCCACAGAGCCTGGATCATGGAACACTGATACTCAGTAAGCACTAGGGAGCATATTGGCTTGTACAGACTTCAGTTTGGATATGTCAGTAACTATGAGGCTGATAAAAGTGCTTTTGGTGCCCATTTAAAAATTACCCATCAGGCCCAGGTACATTGCCAGGTGGCAAAGACTGCGTGATGGGGAAGACGAAAGGATGACATTTAAAAAGGGGAACATTTCATTCATTATTTATCAACAACACTGGAGAGGGCTTCACACTGTCCTATAGTAAACATTTTTGTGAACGTCTCTTTGTTATCCAATAAGTTAAAGTTAATTATGTAACTATTATGCAGTAAAATCCTGTACATGGGTAAATGTGGATACTTTTCTAGACTATTGCCCTTCCTTTTTGGTACACTCTACCACCTTGATATCTCATCTAAACTTAAATTCACACCCTtaccagtggggggggggggggtgttctatGTTCCAGCTAGACCAACAATCAATGAAATCATAATAGTCTTAAAACAGGTGTagaaaatacacacaaaaaaaacacacaaaaacaaggATGCAAGCACAATCGACTTACAGTACTCACCCTTGTTCATAATGTGTTGTCTTTCTGACATTACCGCTTCTGAGAATCTCGCTCAACTTTACTTCCTATTCTGCTTATACTGTATATGATATAGAAATGTATGTATATTTATGTACAATACATCATTTACAATGACATTATATGGTTCCAATCGTTATATAAAATACAAGTAAAATGCATACATAAAATGTGCCAAAATTGATACTTCATCATTGTAACAAACAGTTCAAACAACTGAAGAAGAAAACGTATTTTAAAAAGGGGGAGGTTAAGACTCACTGTGGGAACTATACATGTAACACACTGAGATATTGCATAAGCATACCAGGAATGTGCATAAATATTCCCTCAGGTAAATCACTAATAAATCACACCTGGTGCATGGCAACACACTGCTAGCCACTCAACAGCCTGATGGTCAAAACCGCCATTCAAAAGTCGGGATTACTGCCTGCTTGTAAAGACCGACGTTGCTGTTCGAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTC
>TU9839
TTACCAACTGTATTGTATTTAAAGTGCAGGATTTATGTACAAAAATACAGCTGTGTTGGACTCAGCATCCCAAAGAAACGAGAGAACAGAAGAAAGGCACAAACTccggggagagagaaagagtacagGACAaagtgatagacagagagagagagaaagacactgaGACAAGCAATGAGAGAATAAGAGTGCAACAAGTAACTGAGCAGACAGCATCGTTCCATTGGATCCCTTCCCTACAACACATTCATACACTTCAGGTTTGTACACTAACAAAATGTAAAACATTGTCTTTGTAGAAAACACTACTGTATCCCCAACTACTACAACTGTCTGTTGTTGACTTCAAGGTAATAACAGGCAAATATCGCTCACATTGGATTTAAATCATGACAGAAAACGGTACATGAACAGCCAGCCGTATTAAAATCAACTATTCTTCTCGTTACAGGTCCAAGAATCTATGGGTCATTGACTGAATCTACACCGAGTATACAAAatcatgctctttccatgacactgaccaggtgaaagctatgatcccttattgacgtgacttgttaaatccatttcaaatcagtgtagatgaaggcgaagagacgggttaaagaaggatttttaagccttgagacatggattgtgtgccattcagagggtgaatgtgcaagacaaaatatttatgtgcctttgaacgggggggggggggggggggggggtggtatgatagtaggtgccaggcaatgctgctgggttgttcacactcaacagtttcccgtgtgtatcaagaatggttcaccaccaaaggtcatccagccaacttgacaactgtgcattggagtcaacatggtccagcatccctgtggaatgctttcgacaccttgcagagtcTATGCCCtgacgaactgaggctgttctgaggggaaaaggggagcaactcaatattaggaaggtggaaGGTGTTCCAAAAGTTTGGAATACTCAATGACCAAACACTTTTGAAGTGGAGGAACTATATCCAGTAGAACTACATTAAGTCCAAAGAACAGCATGCCCTCCCAGTCACCTCCCTGTCAAACTCTACATTTATATTCCACTCACTCAGAGTGAAGTGGGGGATTTCTAAATGGAGCCCTCCCTCCAGTGGCCACACGAGGTAATTGGACCAGTTATTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTTTCAGACCCACTACAAACGAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACCCTGTCAGACCCAATACAAACTAGCCTTAGACTAGACTTTTCAGGAACAGCACTATTGGGCAATCATTAAAATCGCTATATTTAAACTGATATTCAAATCTCCTCGGTGCATCACCACTGGCTGGTGTCAGAGCAAGACTCCATGGTGCATGAGACCACCATGGACATAATGAAACGCGTCTTGCCTCTGAAATGTCCAACTGGCTCAACATACAATAAGATGGCTGACGAGAGACATGGAGTCTCTGGCCCAATCCCACCCCTAAATCCTATGTTTAACATATTGCGTACACCAATAAAATCCTCTCAGATCTTCACATGTGCTTAGGGCTTGGGGATGGATTTGGGATTGGGCCAGCGTGTTCTCTTTCAGCTGATATCCATCCTCTTCGGCCACAGAGCCTGGATCATGGAACACTGATACTCAGTAAGCACTAGGGAGCATATTGGCTTGTACAGACTTCAGTTTGGATATGTCAGTAACTATGAGGCTGATAAAAGTGCTTTTGGTGCCCATTTAAAAATTACCCATCAGGCCCAGGTACATTGCCAGGTGGCAAAGACTGCGTGATGGGGAAGACGAAAGGATGACATTTAAAAAGGGGAACATTTCATTCATTATTTATCAACAACACTGGAGAGGGCTTCACACTGTCCTATAGTAAACATTTTTGTGAACGTCTCTTTGTTATCCAATAAGTTAAAGTTAATTATGTAACTATTATGCAGTAAAATCCTGTACATGGGTAAATGTGGATACTTTTCTAGACTATTGCCCTTCCTTTTTGGTACACTCTACCACCTTGATATCTCATCTAAACTTAAATTCACACCCTtaccagtggggggggggggggtgttctatGTTCCAGCTAGACCAACAATCAATGAAATCATAATAGTCTTAAAACAGGTGTagaaaatacacacaaaaaaaacacacaaaaacaaggATGCAAGCACAATCGACTTACAGTACTCACCCTTGTTCATAATGTGTTGTCTTTCTGACATTACCGCTTCTGAGAATCTCGCTCAACTTTACTTCCTATTCTGCTTATACTGTATATGATATAGAAATGTATGTATATTTATGTACAATACATCATTTACAATGACATTATATGGTTCCAATCGTTATATAAAATACAAGTAAAATGCATACATAAAATGTGCCAAAATTGATACTTCATCATTGTAACAAACAGTTCAAACAACTGAAGAAGAAAACGTATTTTAAAAAGGGGGAGGTTAAGACTCACTGTGGGAACTATACATGTAACACACTGAGATATTGCATAAGCATACCAGGAATGTGCATAAATATTCCCTCAGGTAAATCACTAATAAATCACACCTGGTGCATGGCAACACACTGCTAGCCACTCAACAGCCTGATGGTCAAAACCGCCATTCAAAAGTCGGGATTACTGCCTGCTTGTAAAGACCGACGTTGCTGTTCGAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTC
>TU9840
TTACCAACTGTATTGTATTTAAAGTGCAGGATTTATGTACAAAAATACAGCTGTGTTGGACTCAGCATCCCAAAGAAACGAGAGAACAGAAGAAAGGCACAAACTccggggagagagaaagagtacagGACAaagtgatagacagagagagagagaaagacactgaGACAAGCAATGAGAGAATAAGAGTGCAACAAGTAACTGAGCAGACAGCATCGTTCCATTGGATCCCTTCCCTACAACACATTCATACACTTCAGGTTTGTACACTAACAAAATGTAAAACATTGTCTTTGTAGAAAACACTACTGTATCCCCAACTACTACAACTGTCTGTTGTTGACTTCAAGGTAATAACAGGCAAATATCGCTCACATTGGATTTAAATCATGACAGAAAACGGTACATGAACAGCCAGCCGTATTAAAATCAACTATTCTTCTCGTTACAGGTCCAAGAATCTATGGGTCATTGACTGAATCTACACCGAGTATACAAAatcatgctctttccatgacactgaccaggtgaaagctatgatcccttattgacgtgacttgttaaatccatttcaaatcagtgtagatgaaggcgaagagacgggttaaagaaggatttttaagccttgagacatggattgtgtgccattcagagggtgaatgtgcaagacaaaatatttatgtgcctttgaacgggggggggggggggggggggggtggtatgatagtaggtgccaggcaatgctgctgggttgttcacactcaacagtttcccgtgtgtatcaagaatggttcaccaccaaaggtcatccagccaacttgacaactgtgcattggagtcaacatggtccagcatccctgtggaatgctttcgacaccttgcagagtcTATGCCCtgacgaactgaggctgttctgaggggaaaaggggagcaactcaatattaggaaggtggaaGGTGTTCCAAAAGTTTGGAATACTCAATGACCAAACACTTTTGAAGTGGAGGAACTATATCCAGTAGAACTACATTAAGTCCAAAGAACAGCATGCCCTCCCAGTCACCTCCCTGTCAAACTCTACATTTATATTCCACTCACTCAGAGTGAAGTGGGGGATTTCTAAATGGAGCCCTCCCTCCAGTGGCCACACGAGGTAATTGGACCAGTTATTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACTGTGTCAGACCCACTACAAACTAGTTGTTTCCTCACCCTGTCAGACCCAATACAAACTAGCCTTAGACTAGACTTTTCAGGAACAGCACTATTGGGCAATCATTAAAATCGCTATATTTAAACTGATATTCAAATCTCCTCGGTGCATCACCACTGGCTGGTGTCAGAGCAAGACTCCATGGTGCATGAGACCACCATGGACATAATGAAACGCGTCTTGCCTCTGAAATGTCCAACTGGCTCAACATACAATAAGATGGCTGACGAGAGACATGGAGTCTCTGGCCCAATCCCACCCCTAAATCCTATGTTTAACATATTGCGTACACCAATAAAATCCTCTCAGATCTTCACATGTGCTTAGGGCTTGGGGATGGATTTGGGATTGGGCCAGCGTGTTCTCTTTCAGCTGATATCCATCCTCTTCGGCCACAGAGCCTGGATCATGGAACACTGATACTCAGTAAGCACTAGGGAGCATATTGGCTTGTACAGACTTCAGTTTGGATATGTCAGTAACTATGAGGCTGATAAAAGTGCTTTTGGTGCCCATTTAAAAATTACCCATCAGGCCCAGGTACATTGCCAGGTGGCAAAGACTGCGTGATGGGGAAGACGAAAGGATGACATTTAAAAAGGGGAACATTTCATTCATTATTTATCAACAACACTGGAGAGGGCTTCACACTGTCCTATAGTAAACATTTTTGTGAACGTCTCTTTGTTATCCAATAAGTTAAAGTTAATTATGTAACTATTATGCAGTAAAATCCTGTACATGGGTAAATGTGGATACTTTTCTAGACTATTGCCCTTCCTTTTTGGTACACTCTACCACCTTGATATCTCATCTAAACTTAAATTCACACCCTtaccagtggggggggggggggtgttctatGTTCCAGCTAGACCAACAATCAATGAAATCATAATAGTCTTAAAACAGGTGTagaaaatacacacaaaaaaaacacacaaaaacaaggATGCAAGCACAATCGACTTACAGTACTCACCCTTGTTCATAATGTGTTGTCTTTCTGACATTACCGCTTCTGAGAATCTCGCTCAACTTTACTTCCTATTCTGCTTATACTGTATATGATATAGAAATGTATGTATATTTATGTACAATACATCATTTACAATGACATTATATGGTTCCAATCGTTATATAAAATACAAGTAAAATGCATACATAAAATGTGCCAAAATTGATACTTCATCATTGTAACAAACAGTTCAAACAACTGAAGAAGAAAACGTATTTTAAAAAGGGGGAGGTTAAGACTCACTGTGGGAACTATACATGTAACACACTGAGATATTGCATAAGCATACCAGGAATGTGCATAAATATTCCCTCAGGTAAATCACTAATAAATCACACCTGGTGCATGGCAACACACTGCTAGCCACTCAACAGCCTGATGGTCAAAACCGCCATTCAAAAGTCGGGATTACTGCCTGCTTGTAAAGACCGACGTTGCTGTTCGAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTCTGTCGCACCGTGCTCTTCCGACATCACAACTAATAAAGACGTGGCGGTTTAAAAGTAATGACAACCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9838 False 2902 lncRNA 0.53 2 9312415 9315424
TU9839 False 2974 lncRNA 0.31 2 9312415 9315424
TU9840 True 2902 lncRNA 0.31 2 9312415 9315424

Neighbor

gene id symbol gene type direction distance location
psmd1 psmd1 coding upstream 12350 9240119 ~ 9300065 (+)
LOC110531147 cssa16h2orf72 coding upstream 91007 9218658 ~ 9221408 (+)
LOC110531220 NA coding upstream 129333 9171968 ~ 9183082 (+)
usp13 LOC106574137 coding upstream 397015 8877591 ~ 8915400 (+)
ndufb5 LOC106574141 coding upstream 441131 8868110 ~ 8871284 (+)
LOC118966743 LOC106574127 coding downstream 113093 9428517 ~ 9436879 (+)
LOC118966784 LOC106574127 coding downstream 135508 9450932 ~ 9460358 (+)
LOC118966781 LOC106574155 coding downstream 148622 9464046 ~ 9471323 (+)
LOC118936726 LOC106574155 coding downstream 161264 9476688 ~ 9477259 (+)
LOC110510917 LOC106574155 coding downstream 165615 9481039 ~ 9483610 (+)
G8031 NA non-coding upstream 8305 9303962 ~ 9304110 (+)
G8030 NA non-coding upstream 8827 9303092 ~ 9303588 (+)
G8009 NA non-coding upstream 74182 9238004 ~ 9238233 (+)
G8000 NA non-coding upstream 80659 9231526 ~ 9231756 (+)
G7780 NA non-coding upstream 93921 9217219 ~ 9218494 (+)
G8075 NA non-coding downstream 51052 9366476 ~ 9367099 (+)
G8142 NA non-coding downstream 201431 9516855 ~ 9557160 (+)
G8143 NA non-coding downstream 205363 9520787 ~ 9561179 (+)
G8144 NA non-coding downstream 211072 9526496 ~ 9677481 (+)
LOC110505168 LOC106574179 other upstream 1056537 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1082180 8229189 ~ 8231566 (+)
G6807 NA other upstream 1275261 8036617 ~ 8037154 (+)
G6518 NA other upstream 1426508 7885391 ~ 7885907 (+)
G6434 NA other upstream 1586806 7725046 ~ 7725609 (+)
LOC110510920 LOC106574155 other downstream 668351 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 825820 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2161240 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3923189 13238613 ~ 13295452 (+)

Expression


Co-expression Network