G8142


Basic Information

Item Value
gene id G8142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9516855 ~ 9557160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9964
ATGTACCTTCTAAGCATGATGGTTGGCTCATGATTTGTTTGTACTGAAATCTATTCAGGGAGGATAAGGGTATATCATaggcagtgatgtagtggtaaaaccATTGACTGGTAAATGCTGATTGCCGTTCAGGATTAAAGAAGTAACGCTCCCTCTACTTTCAATGCATCTTCCACAAAAGGTGGGTAAATGCttgcacaaaataaaataaaaagtgtgtAAACAGCTTTTAcatgtgttcccccccccccaccactgaTTATAGGAGGCTTCTTCTGACAGTATTCACACCTTTCATAAGAAACCTCCAGAGAAATATTCATATTCACCGTAGCTGTCATTTAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9964 True 348 lncRNA 0.43 2 9516855 9557160

Neighbor

gene id symbol gene type direction distance location
LOC118936734 LOC106574127 coding upstream 3380 9505888 ~ 9513475 (+)
LOC118936706 LOC106574155 coding upstream 20576 9493321 ~ 9496279 (+)
LOC118936730 LOC106574155 coding upstream 27334 9488950 ~ 9489521 (+)
LOC110510917 LOC106574155 coding upstream 33245 9481039 ~ 9483610 (+)
LOC118936726 LOC106574155 coding upstream 39596 9476688 ~ 9477259 (+)
LOC110522382 LOC106574127 coding downstream 7332 9564492 ~ 9572580 (+)
LOC118937346 LOC106574127 coding downstream 29303 9586463 ~ 9647813 (+)
LOC118937622 LOC106574155 coding downstream 49470 9606630 ~ 9609304 (+)
LOC118937363 LOC106574127 coding downstream 56495 9613655 ~ 9623904 (+)
LOC118937339 LOC106574127 coding downstream 80583 9637743 ~ 9668473 (+)
G8075 NA non-coding upstream 149756 9366476 ~ 9367099 (+)
G8032 NA non-coding upstream 201431 9312415 ~ 9315424 (+)
G8031 NA non-coding upstream 212745 9303962 ~ 9304110 (+)
G8030 NA non-coding upstream 213267 9303092 ~ 9303588 (+)
G8157 NA non-coding downstream 16485 9573645 ~ 9574529 (+)
G8158 NA non-coding downstream 18676 9575836 ~ 9788175 (+)
G8167 NA non-coding downstream 44863 9602023 ~ 9602478 (+)
LOC118966784 LOC106574127 other upstream 56902 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1260977 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1286620 8229189 ~ 8231566 (+)
G6807 NA other upstream 1479701 8036617 ~ 8037154 (+)
G6518 NA other upstream 1630948 7885391 ~ 7885907 (+)
LOC110510920 LOC106574155 other downstream 426615 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 584084 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1919504 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3681453 13238613 ~ 13295452 (+)
G12410 NA other downstream 4071703 13617059 ~ 13666871 (+)

Expression


Co-expression Network