G8143


Basic Information

Item Value
gene id G8143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9520787 ~ 9561179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9967
GCTCTGGACATGTACCCAGGGACCTCTGTACAACAACACTTCACACTCACGAAGCAGTGTTCTTACTAACCAATCACTCTACCATAACCATGGTCTCAGTATAAAGCAGTGTCCTTACTAACCAATCACTCTACCATAACCATGGTCTTGGTTGAGCAAGGGCAATATTACTTTAAGTCTCAAGCAGGGTGACCTCAACATACTATATATCGCCATACTATATACCACcacactatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcataggtacacttcaactatgacagacaaaatgagaaaaaaaaatccagaaaaatcacattgtaggattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9967 True 388 lncRNA 0.45 2 9520787 9561179

Neighbor

gene id symbol gene type direction distance location
LOC118936734 LOC106574127 coding upstream 7312 9505888 ~ 9513475 (+)
LOC118936706 LOC106574155 coding upstream 24508 9493321 ~ 9496279 (+)
LOC118936730 LOC106574155 coding upstream 31266 9488950 ~ 9489521 (+)
LOC110510917 LOC106574155 coding upstream 37177 9481039 ~ 9483610 (+)
LOC118936726 LOC106574155 coding upstream 43528 9476688 ~ 9477259 (+)
LOC110522382 LOC106574127 coding downstream 3313 9564492 ~ 9572580 (+)
LOC118937346 LOC106574127 coding downstream 25284 9586463 ~ 9647813 (+)
LOC118937622 LOC106574155 coding downstream 45451 9606630 ~ 9609304 (+)
LOC118937363 LOC106574127 coding downstream 52476 9613655 ~ 9623904 (+)
LOC118937339 LOC106574127 coding downstream 76564 9637743 ~ 9668473 (+)
G8075 NA non-coding upstream 153688 9366476 ~ 9367099 (+)
G8032 NA non-coding upstream 205363 9312415 ~ 9315424 (+)
G8031 NA non-coding upstream 216677 9303962 ~ 9304110 (+)
G8030 NA non-coding upstream 217199 9303092 ~ 9303588 (+)
G8157 NA non-coding downstream 12466 9573645 ~ 9574529 (+)
G8158 NA non-coding downstream 14657 9575836 ~ 9788175 (+)
G8167 NA non-coding downstream 40844 9602023 ~ 9602478 (+)
LOC118966784 LOC106574127 other upstream 60834 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1264909 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1290552 8229189 ~ 8231566 (+)
G6807 NA other upstream 1483633 8036617 ~ 8037154 (+)
G6518 NA other upstream 1634880 7885391 ~ 7885907 (+)
LOC110510920 LOC106574155 other downstream 422596 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 580065 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1915485 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3677434 13238613 ~ 13295452 (+)
G12410 NA other downstream 4067684 13617059 ~ 13666871 (+)

Expression


Co-expression Network