G8455 (LOC106574127)


Basic Information

Item Value
gene id G8455
gene name LOC106574127
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9567941 ~ 9590586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU10337
ACCTTGGTCTGTGAGTCTCCCCTTACCGGTGTCACTAGAGAGGTTTGACTTGCGGAGGCACTCTTAACGACCACTGATAAGGCCGACTTGACATCTTTAGCCAACTCTGCCATTACAGCAGGGGTTAGCATCATAGAGCCTGCACTTCCAGATGGAGAATTGGACATGCATGCAAGTTTGGAGAGAGAACATTGCAGGCTGTCCTGCACACAGGTGACGAGGGTGTCCTCTGAGACACCTAAGAGGACTTGTAGCGTCTCAGAATTGGTTGTTTTCTTCTGCAcatcagacagagaggttagagtccTTGGGAAAAAAAACGCAGAAATCATCAAAGTCAAACAAATAATATGTAAGGCTGTGATGcacattcagtgtgtcaaatacatCTGCACCATTGAAAACAATGAGGAAAACGCTGCTGTTTCTCTGAGAAAAAACCTTAGTGTGATGTCAGCCTAACTGCTTAATTTCTAAAgcccaataaaatgtattttgtataagTCATTTGTATTGAAACTGGCCTGTAGATATCTATCTATCCTGGCAATATCTATCCTCTA

Function

NR:

description
uncharacterized protein LOC110514907

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10337 True 563 TUCP 0.40 2 9567941 9590586

Neighbor

gene id symbol gene type direction distance location
LOC110515168 ankub1 coding downstream 10660 9515908 ~ 9557281 (-)
LOC118966297 ankub1 coding downstream 62596 9497513 ~ 9505345 (-)
LOC118936718 ankub1 coding downstream 70353 9439687 ~ 9497588 (-)
ppp1r2 LOC106574129 coding downstream 142269 9391663 ~ 9425672 (-)
LOC110530621 LOC106574130 coding downstream 183880 9309353 ~ 9384061 (-)
LOC110511241 ankub1 coding upstream 57947 9648533 ~ 9696603 (-)
LOC110530072 ankub1 coding upstream 98396 9688982 ~ 9788702 (-)
LOC110518492 ankub1 coding upstream 198578 9789164 ~ 9811777 (-)
LOC110519733 ankub1 coding upstream 236701 9827287 ~ 9830366 (-)
LOC110514871 ankub1 coding upstream 242694 9833280 ~ 9894696 (-)
LOC118937727 ankub1 non-coding downstream 5325 9557345 ~ 9576558 (-)
G8445 NA non-coding downstream 27888 9539746 ~ 9540053 (-)
G8349 NA non-coding downstream 260698 9306992 ~ 9307243 (-)
G8347 NA non-coding downstream 261966 9305638 ~ 9305975 (-)
G8344 NA non-coding downstream 265233 9302469 ~ 9302708 (-)
G8479 LOC106574155 non-coding upstream 110678 9701264 ~ 9724238 (-)
G8532 NA non-coding upstream 319300 9909886 ~ 9931006 (-)
G8547 NA non-coding upstream 391632 9982218 ~ 9982559 (-)
G8574 NA non-coding upstream 452600 10043186 ~ 10043434 (-)
G7965 NA other downstream 384907 9181455 ~ 9194911 (-)
G7985 NA other downstream 413994 9153270 ~ 9153947 (-)
LOC110529747 tsc22d2 other downstream 1192377 8330314 ~ 8419050 (-)
G7184 LOC100135997 other downstream 1384008 8164276 ~ 8183933 (-)
G6810 LOC107579696 other downstream 1528478 8039179 ~ 8039463 (-)
G10263 NA other upstream 1972151 11562737 ~ 11563125 (-)
G10343 NA other upstream 2054494 11645080 ~ 11645703 (-)
G10776 NA other upstream 2265124 11855710 ~ 11856390 (-)
G10792 NA other upstream 2282519 11873105 ~ 11873891 (-)
LOC118938491 NA other upstream 2596318 12186901 ~ 12205391 (-)

Expression


Co-expression Network