G8238


Basic Information

Item Value
gene id G8238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9927839 ~ 9947260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU10076
atcaaatggccactggacaaGTTCAACTGttttattatttgttactttagtttattggGTAAATATTCTCttcaactcttcttgaactgcactgtttgttaagggcttgtaagtaaagtaTTTCACGGAaagatctacacttgttgtattcagcgcatgtgacaaataaagtttgatttgatttgactatgtACCTTCTAAGCATGATGGTTGGCTCATGATTTGTTTGTACTGAAATCTATTCAGGGAGGATAAGGGTATATCATaggcagtgatgtagtggtaaaaacaTTGACTGGTAAATGCTGATTGCCGTTCAGGATTAAAGAAGTAACGCTCCCTCTACTTTCAATGCATCTTCCACAAAAGGTGGGTAAATGCt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10076 True 382 lncRNA 0.42 2 9927839 9947260

Neighbor

gene id symbol gene type direction distance location
LOC118937370 LOC106574127 coding upstream 3082 9917155 ~ 9924757 (+)
LOC118937372 LOC106574127 coding upstream 19954 9900861 ~ 9925501 (+)
LOC110510777 LOC106574127 coding upstream 38028 9878726 ~ 9889811 (+)
LOC118936775 LOC106574155 coding upstream 58732 9861152 ~ 9869107 (+)
LOC110515172 LOC106574127 coding upstream 82724 9837528 ~ 9845115 (+)
LOC118937321 LOC106574127 coding downstream 9418 9956678 ~ 9964323 (+)
LOC110510920 LOC106574155 coding downstream 33267 9980527 ~ 9991542 (+)
LOC110533060 gnb4 coding downstream 65441 10012701 ~ 10048677 (+)
ftsj3 ftsj3 coding downstream 140040 10087300 ~ 10096757 (+)
asb3 LOC106574148 coding downstream 149683 10096943 ~ 10101637 (+)
G8225 NA non-coding upstream 12446 9859404 ~ 9915393 (+)
G8158 NA non-coding upstream 139664 9575836 ~ 9788175 (+)
G8191 NA non-coding upstream 142277 9706196 ~ 9785562 (+)
LOC118937357 LOC106574127 non-coding upstream 229296 9676218 ~ 9726523 (+)
G8263 NA non-coding downstream 60750 10008010 ~ 10008505 (+)
G8264 NA non-coding downstream 61760 10009020 ~ 10009350 (+)
G8265 NA non-coding downstream 63756 10011016 ~ 10011230 (+)
G8266 NA non-coding downstream 64590 10011850 ~ 10012067 (+)
G8253 NA non-coding downstream 103781 10051041 ~ 10053076 (+)
LOC118966784 LOC106574127 other upstream 467886 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 1671961 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1697604 8229189 ~ 8231566 (+)
G6807 NA other upstream 1890685 8036617 ~ 8037154 (+)
G6518 NA other upstream 2041932 7885391 ~ 7885907 (+)
gipc3 LOC106574151 other downstream 193984 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1529404 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3291353 13238613 ~ 13295452 (+)
G12410 NA other downstream 3681603 13617059 ~ 13666871 (+)

Expression


Co-expression Network