G8971


Basic Information

Item Value
gene id G8971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 10243766 ~ 10245431 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU10900
CAACTAGTGGACTCACCCAGCAGATTTCACAGATGTATATGAAAACCATACTTCTACCACTCACTGTTTGGTGCAGGCTTTGGTTTAATCTTTTTCAACTAGTGTTCAATAAGGACTCTGCTTTAGTTTAATCCTATTAAACTAGTGTTCAATACGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGGCTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGGCTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATACGGACTCTGCTTTGGTATAATCCTATTCAACTAGTGTTCAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTTAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATACGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGACTCTGCTTTGGTTTAATCCTATTCAAATAGTGTTTAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTTAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGGCTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGGCTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATACGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTTAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTTAATAAGGACTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTTAATAAGGACTCTGCTTTGGTTTAATCCTATTCAACTAATGTTCAATACGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGACTCTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGGCTTTGCTTTGGTTTAATCCTATTCAACTAGTGTTCAATAAGGTCTCTGCTTTGGTTTAATCCTATTCAAATAGTATTCAATAAGGACTCTGCCTTGGTTTAATCTTTTTCAACTCGTGTTTAATTAAGGACTCTGGTTAGTTGAAGCAGGTGTGTTGAGTTATCCTCTCTTTGTTCCAATGAACCATGGATCCAGCACttgaaaatacttttttttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10900 True 1236 lncRNA 0.40 2 10243766 10245431

Neighbor

gene id symbol gene type direction distance location
LOC110533608 LOC106574152 coding downstream 62474 10166558 ~ 10181292 (-)
LOC110533496 LOC106574150 coding downstream 115518 10110040 ~ 10128248 (-)
LOC110533192 LOC106574144 coding downstream 164192 10053841 ~ 10079574 (-)
LOC110532571 LOC106574142 coding downstream 238046 9965739 ~ 10005720 (-)
LOC110514908 ankub1 coding downstream 265963 9948910 ~ 9977803 (-)
LOC118966751 NA coding upstream 731676 10977107 ~ 10977162 (-)
LOC110533913 LOC106574093 coding upstream 1068440 11313634 ~ 11411835 (-)
LOC110533997 LOC106574092 coding upstream 1167394 11412825 ~ 11425966 (-)
LOC110524396 LOC106574087 coding upstream 1553984 11799415 ~ 11802397 (-)
LOC110534151 LOC106574088 coding upstream 1565277 11810708 ~ 11819081 (-)
LOC110522842 LOC106574153 non-coding downstream 21675 10220327 ~ 10622579 (-)
G8601 NA non-coding downstream 106022 10137419 ~ 10137744 (-)
G8589 NA non-coding downstream 159311 10083785 ~ 10084455 (-)
G8399 NA non-coding downstream 190542 10051070 ~ 10053224 (-)
G8574 NA non-coding downstream 200332 10043186 ~ 10043434 (-)
G8990 NA non-coding upstream 45513 10290944 ~ 10291475 (-)
G8991 NA non-coding upstream 46371 10291802 ~ 10292310 (-)
G8992 NA non-coding upstream 47216 10292647 ~ 10294520 (-)
G8996 NA non-coding upstream 56909 10302340 ~ 10305030 (-)
G8999 NA non-coding upstream 63811 10309242 ~ 10309879 (-)
G8455 LOC106574127 other downstream 653180 9567941 ~ 9590586 (-)
G7965 NA other downstream 1060732 9181455 ~ 9194911 (-)
G7985 NA other downstream 1089819 9153270 ~ 9153947 (-)
LOC110529747 tsc22d2 other downstream 1868202 8330314 ~ 8419050 (-)
G7184 LOC100135997 other downstream 2059833 8164276 ~ 8183933 (-)
G10263 NA other upstream 1317306 11562737 ~ 11563125 (-)
G10343 NA other upstream 1399649 11645080 ~ 11645703 (-)
G10776 NA other upstream 1610279 11855710 ~ 11856390 (-)
G10792 NA other upstream 1627674 11873105 ~ 11873891 (-)
LOC118938491 NA other upstream 1941473 12186901 ~ 12205391 (-)

Expression


Co-expression Network