Gene
RNA
| Item | Value |
|---|---|
| gene id | G8846 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 10561144 ~ 10562327 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10762 | True | 689 | lncRNA | 0.38 | 3 | 10561144 | 10562327 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gipc3 | LOC106574151 | coding | upstream | 398196 | 10140230 ~ 10162948 (+) |
| lim2.2 | LOC106574149 | coding | upstream | 453256 | 10104169 ~ 10107888 (+) |
| asb3 | LOC106574148 | coding | upstream | 459507 | 10096943 ~ 10101637 (+) |
| ftsj3 | ftsj3 | coding | upstream | 464387 | 10087300 ~ 10096757 (+) |
| LOC110533060 | gnb4 | coding | upstream | 512467 | 10012701 ~ 10048677 (+) |
| LOC110523899 | LOC106574090 | coding | downstream | 870775 | 11433102 ~ 11514427 (+) |
| LOC110534079 | LOC106574089 | coding | downstream | 1102281 | 11664608 ~ 11666692 (+) |
| ccdc50 | ccd50 | coding | downstream | 1283392 | 11845719 ~ 11879266 (+) |
| LOC110534540 | LOC106574080 | coding | downstream | 1341364 | 11903691 ~ 11906713 (+) |
| LOC110534688 | LOC106573995 | coding | downstream | 1360249 | 11922576 ~ 12025076 (+) |
| G8764 | NA | non-coding | upstream | 140608 | 10417343 ~ 10420536 (+) |
| G8695 | NA | non-coding | upstream | 259956 | 10299882 ~ 10301188 (+) |
| G8652 | NA | non-coding | upstream | 336533 | 10222257 ~ 10224611 (+) |
| G8651 | NA | non-coding | upstream | 339068 | 10220344 ~ 10222076 (+) |
| G8600 | NA | non-coding | upstream | 423578 | 10137334 ~ 10137566 (+) |
| G8871 | NA | non-coding | downstream | 54902 | 10617229 ~ 10671287 (+) |
| G9241 | NA | non-coding | downstream | 120884 | 10683211 ~ 10683506 (+) |
| G9242 | NA | non-coding | downstream | 121335 | 10683662 ~ 10684007 (+) |
| G9249 | NA | non-coding | downstream | 127998 | 10690325 ~ 10690524 (+) |
| G9273 | NA | non-coding | downstream | 143895 | 10706222 ~ 10706442 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 569602 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 1101191 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 2305266 | 8255142 ~ 8271732 (+) |
| LOC110501328 | LOC106574178 | other | upstream | 2330909 | 8229189 ~ 8231566 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 2676286 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 3066536 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 3630129 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 4117023 | 14679350 ~ 14679578 (+) |
