G9464


Basic Information

Item Value
gene id G9464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 10874429 ~ 10874896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11416
GaatctgtcctcacctcctgacctcaacccctccaccTAAACCACAGATGTGCATCTTTCTTCCCAATATCAACACGTTGCTCTCCTCTcgtccacccaacacattccaaagccttCTGTCTTTCTTCAGAGAACCCTTAACTTCTGACATAAAACTCTCTTTTACTCCTTTCATTCTATGCTTCTTTCCTATCATTTATTtcatatctcaatgttcaaagtttagccGAGTCCAACAGTCCTTCCTCTTGAACAATAGCGTCCTAATGTTCAATTTACATAAACAGATAAACAATGATAATAAAACatgaatttacaaaaaaacgAACAAATGATTATAAAATATGaattaaacaaacaaataaatgaaCAAACAACGAACAAACATTCACCGCAAAGTTTACAAATTCAGAGACTTACTGCCTCTGTACTATGATCACACATTTTTATTTCCATCTATCATTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11416 True 468 lncRNA 0.40 1 10874429 10874896

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 711481 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 766541 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 772792 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 777672 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 825752 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 558206 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 789712 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 970823 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 1028795 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 1047680 11922576 ~ 12025076 (+)
G9458 NA non-coding upstream 4132 10869901 ~ 10870297 (+)
G9446 NA non-coding upstream 4542 10863293 ~ 10869887 (+)
G9444 NA non-coding upstream 11711 10862457 ~ 10862718 (+)
G9443 NA non-coding upstream 12551 10861610 ~ 10861878 (+)
G9442 NA non-coding upstream 12848 10861337 ~ 10861581 (+)
G9470 NA non-coding downstream 5612 10880508 ~ 10880783 (+)
G9504 NA non-coding downstream 36596 10911492 ~ 10912077 (+)
G9509 NA non-coding downstream 39836 10914732 ~ 10915135 (+)
G9511 NA non-coding downstream 41160 10916056 ~ 10916280 (+)
G9591 NA non-coding downstream 129891 11004787 ~ 11005103 (+)
LOC110510920 LOC106574155 other upstream 882887 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1414476 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2618551 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 2644194 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 2363717 13238613 ~ 13295452 (+)
G12410 NA other downstream 2753967 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 3317560 14192456 ~ 14214939 (+)
G13380 NA other downstream 3804454 14679350 ~ 14679578 (+)

Expression


Co-expression Network