G9470


Basic Information

Item Value
gene id G9470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 10880508 ~ 10880783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11422
cacaAGAGtaacattcagaaatgttcttatagaatagatgtttcggcggttgtcttCGCATTCAAATGACATaaattctagctgcagactagtaattagtatcgaagatttgctcttattctgtcggtatcgatagtctcagagtttaacaaccattacaaccttagcTTATACTGAAGGTACgcatggtctctactcaaaccttagccctctcggtaATCGACGTATgcatggtctctactcaaaccttagccctctcggtaATCGACGTATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11422 True 276 lncRNA 0.52 1 10880508 10880783

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 717560 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 772620 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 778871 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 783751 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 831831 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 552319 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 783825 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 964936 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 1022908 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 1041793 11922576 ~ 12025076 (+)
G9464 NA non-coding upstream 5612 10874429 ~ 10874896 (+)
G9458 NA non-coding upstream 10211 10869901 ~ 10870297 (+)
G9446 NA non-coding upstream 10621 10863293 ~ 10869887 (+)
G9444 NA non-coding upstream 17790 10862457 ~ 10862718 (+)
G9443 NA non-coding upstream 18630 10861610 ~ 10861878 (+)
G9504 NA non-coding downstream 30709 10911492 ~ 10912077 (+)
G9509 NA non-coding downstream 33949 10914732 ~ 10915135 (+)
G9511 NA non-coding downstream 35273 10916056 ~ 10916280 (+)
G9591 NA non-coding downstream 124004 11004787 ~ 11005103 (+)
G9593 NA non-coding downstream 125008 11005791 ~ 11006030 (+)
LOC110510920 LOC106574155 other upstream 888966 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1420555 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2624630 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 2650273 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 2357830 13238613 ~ 13295452 (+)
G12410 NA other downstream 2748080 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 3311673 14192456 ~ 14214939 (+)
G13380 NA other downstream 3798567 14679350 ~ 14679578 (+)

Expression


Co-expression Network