G9591


Basic Information

Item Value
gene id G9591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11004787 ~ 11005103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11550
atattttccaacggggctatacatttgggtgagtttttttttctcgcctgagtagtcctgtttcactgccaaaaataaaattaaaccatctagtgttcagtgaaataacaacacaatgtcaaatacaggtagcctcgtcaaataattaacatccaatcacattaattAACTGTTACTCTCTTGCGGGAAATCCACTAATGGTCCGTaggtagccaaacgtagctgctgctcatgttggtatctgtactgatggtgcaaaagccatgacagggagacatagtggagtgggaacgtgtgtgcaagcagttgctcccgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11550 True 317 lncRNA 0.40 1 11004787 11005103

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 841839 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 896899 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 903150 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 908030 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 956110 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 427999 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 659505 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 840616 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 898588 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 917473 11922576 ~ 12025076 (+)
G9511 NA non-coding upstream 88507 10916056 ~ 10916280 (+)
G9509 NA non-coding upstream 89652 10914732 ~ 10915135 (+)
G9504 NA non-coding upstream 92710 10911492 ~ 10912077 (+)
G9470 NA non-coding upstream 124004 10880508 ~ 10880783 (+)
G9464 NA non-coding upstream 129891 10874429 ~ 10874896 (+)
G9593 NA non-coding downstream 688 11005791 ~ 11006030 (+)
G9745 NA non-coding downstream 109939 11115042 ~ 11115249 (+)
G9784 NA non-coding downstream 133843 11138946 ~ 11139162 (+)
G9786 NA non-coding downstream 135388 11140491 ~ 11140699 (+)
G9814 NA non-coding downstream 174730 11179833 ~ 11181271 (+)
LOC110510920 LOC106574155 other upstream 1013245 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1544834 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2748909 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 2774552 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 2233510 13238613 ~ 13295452 (+)
G12410 NA other downstream 2623760 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 3187353 14192456 ~ 14214939 (+)
G13380 NA other downstream 3674247 14679350 ~ 14679578 (+)

Expression


Co-expression Network