G9593


Basic Information

Item Value
gene id G9593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11005791 ~ 11006030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11552
ctgttaagacactgatgccctttgcaaccacgtacctatgtgaatgtggattctcggccctcactagcatgaaaactaaatacaggcacagactgtgtgtggaaaatgagttaagacagactctctccaatacaacctaacattgcagagttatgtgcatcttttcaagcacacccttctcattaacctgtggtgagtcattcaccatttttgatgaacaaataaggttttctATGTAAG

Function

NR:

description
zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11552 True 240 lncRNA 0.37 1 11005791 11006030

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 842843 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 897903 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 904154 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 909034 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 957114 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 427072 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 658578 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 839689 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 897661 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 916546 11922576 ~ 12025076 (+)
G9591 NA non-coding upstream 688 11004787 ~ 11005103 (+)
G9511 NA non-coding upstream 89511 10916056 ~ 10916280 (+)
G9509 NA non-coding upstream 90656 10914732 ~ 10915135 (+)
G9504 NA non-coding upstream 93714 10911492 ~ 10912077 (+)
G9470 NA non-coding upstream 125008 10880508 ~ 10880783 (+)
G9745 NA non-coding downstream 109012 11115042 ~ 11115249 (+)
G9784 NA non-coding downstream 132916 11138946 ~ 11139162 (+)
G9786 NA non-coding downstream 134461 11140491 ~ 11140699 (+)
G9814 NA non-coding downstream 173803 11179833 ~ 11181271 (+)
G9845 NA non-coding downstream 179776 11185806 ~ 11186075 (+)
LOC110510920 LOC106574155 other upstream 1014249 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1545838 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2749913 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 2775556 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 2232583 13238613 ~ 13295452 (+)
G12410 NA other downstream 2622833 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 3186426 14192456 ~ 14214939 (+)
G13380 NA other downstream 3673320 14679350 ~ 14679578 (+)

Expression


Co-expression Network