G9784


Basic Information

Item Value
gene id G9784
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11138946 ~ 11139162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11748
GGAAAAGTgatgcatgcatatgtattcaccccctttgctatgacgcccctaaataagatctggttcaaccaattaccttcagaagtcacataattacttctaatctaagtgtcacatgatctctcacatgatctcagtatatatatatacacctgttctgaattgccccagagtctgcaacaccactaagcaaggggcaccaccaagcaagcagcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU11748 True 217 lncRNA 0.47 1 11138946 11139162

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 975998 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1031058 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1037309 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 1042189 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 1090269 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 293940 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 525446 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 706557 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 764529 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 783414 11922576 ~ 12025076 (+)
G9745 NA non-coding upstream 23697 11115042 ~ 11115249 (+)
G9593 NA non-coding upstream 132916 11005791 ~ 11006030 (+)
G9591 NA non-coding upstream 133843 11004787 ~ 11005103 (+)
G9511 NA non-coding upstream 222666 10916056 ~ 10916280 (+)
G9509 NA non-coding upstream 223811 10914732 ~ 10915135 (+)
G9786 NA non-coding downstream 1329 11140491 ~ 11140699 (+)
G9814 NA non-coding downstream 40671 11179833 ~ 11181271 (+)
G9845 NA non-coding downstream 46644 11185806 ~ 11186075 (+)
G9869 NA non-coding downstream 63397 11202559 ~ 11202761 (+)
G9903 NA non-coding downstream 95816 11234978 ~ 11235387 (+)
LOC110510920 LOC106574155 other upstream 1147404 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1678993 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2883068 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 2908711 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 2099451 13238613 ~ 13295452 (+)
G12410 NA other downstream 2489701 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 3053294 14192456 ~ 14214939 (+)
G13380 NA other downstream 3540188 14679350 ~ 14679578 (+)

Expression


Co-expression Network