G9905


Basic Information

Item Value
gene id G9905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11239305 ~ 11239540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11880
catacatgtattgtgtaacatgaagtcctatgagtgtcatctgatgaagatcatcaaaggttggtgattcattttatctctatttctgctttttgtgacctctctttgactggaaaaattgctgtttttctgtgacttggtactgacctaacataatagttTGGTGTGCTtccgtcgtaaagcctttttgaaaccgGACACTGTGGCTGAATTTACAACAAgcgtatctttaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11880 True 236 lncRNA 0.39 1 11239305 11239540

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 1076357 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1131417 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1137668 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 1142548 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 1190628 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 193562 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 425068 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 606179 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 664151 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 683036 11922576 ~ 12025076 (+)
G9903 NA non-coding upstream 3918 11234978 ~ 11235387 (+)
G9869 NA non-coding upstream 36544 11202559 ~ 11202761 (+)
G9845 NA non-coding upstream 53230 11185806 ~ 11186075 (+)
G9814 NA non-coding upstream 58034 11179833 ~ 11181271 (+)
G9786 NA non-coding upstream 98606 11140491 ~ 11140699 (+)
G9909 NA non-coding downstream 13402 11252942 ~ 11253257 (+)
G9913 NA non-coding downstream 20209 11259749 ~ 11260055 (+)
G9920 NA non-coding downstream 35981 11275521 ~ 11275822 (+)
G9929 NA non-coding downstream 50948 11290488 ~ 11290688 (+)
G9934 NA non-coding downstream 59204 11298744 ~ 11298971 (+)
LOC110510920 LOC106574155 other upstream 1247763 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1779352 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2983427 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 3009070 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 1999073 13238613 ~ 13295452 (+)
G12410 NA other downstream 2389323 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 2952916 14192456 ~ 14214939 (+)
G13380 NA other downstream 3439810 14679350 ~ 14679578 (+)

Expression


Co-expression Network