G9909


Basic Information

Item Value
gene id G9909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11252942 ~ 11253257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11884
gtactggtacctcgtgtatatagccatgttattacctcgtcctcctgcacattgactcagtactggtaccttgtgtatatagccatgttattacctcgtcctcctgcacattgactcagttctggtaccttgtgtatatagccatgttattacctcgtcctcctgcacattgactcagtactggtacctcgtgtatatagccatgttattacctcgtcctcctgcacattgactcagttctggtaccttgtgtatatagccatgttattaccttgtcctcctgcacattgactcagttctggtaccttgtgtatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11884 True 316 lncRNA 0.50 1 11252942 11253257

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 1089994 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1145054 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1151305 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 1156185 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 1204265 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 179845 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 411351 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 592462 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 650434 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 669319 11922576 ~ 12025076 (+)
G9905 NA non-coding upstream 13402 11239305 ~ 11239540 (+)
G9903 NA non-coding upstream 17555 11234978 ~ 11235387 (+)
G9869 NA non-coding upstream 50181 11202559 ~ 11202761 (+)
G9845 NA non-coding upstream 66867 11185806 ~ 11186075 (+)
G9814 NA non-coding upstream 71671 11179833 ~ 11181271 (+)
G9913 NA non-coding downstream 6492 11259749 ~ 11260055 (+)
G9920 NA non-coding downstream 22264 11275521 ~ 11275822 (+)
G9929 NA non-coding downstream 37231 11290488 ~ 11290688 (+)
G9934 NA non-coding downstream 45487 11298744 ~ 11298971 (+)
G9935 NA non-coding downstream 47161 11300418 ~ 11301310 (+)
LOC110510920 LOC106574155 other upstream 1261400 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1792989 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 2997064 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 3022707 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 1985356 13238613 ~ 13295452 (+)
G12410 NA other downstream 2375606 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 2939199 14192456 ~ 14214939 (+)
G13380 NA other downstream 3426093 14679350 ~ 14679578 (+)

Expression


Co-expression Network