G9920


Basic Information

Item Value
gene id G9920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11275521 ~ 11275822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU11895
ccttaaaaatgtagctctataggagaaagccctgcctccagctgtttgcttagaaattctagggacaattaggaggcctgcgtcttgtgaccatagcgtatgtgtaggtatgtacggcaggaccaaatcagagagataggtaggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgccttgacaggaagccagtgtagaggctagcactggagtaatatgatcaaatattttggttctagtcaagattctagcagccgtgttaaGCACTAACtggagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11895 True 302 lncRNA 0.45 1 11275521 11275822

Neighbor

gene id symbol gene type direction distance location
gipc3 LOC106574151 coding upstream 1112573 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1167633 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1173884 10096943 ~ 10101637 (+)
ftsj3 ftsj3 coding upstream 1178764 10087300 ~ 10096757 (+)
LOC110533060 gnb4 coding upstream 1226844 10012701 ~ 10048677 (+)
LOC110523899 LOC106574090 coding downstream 157280 11433102 ~ 11514427 (+)
LOC110534079 LOC106574089 coding downstream 388786 11664608 ~ 11666692 (+)
ccdc50 ccd50 coding downstream 569897 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 627869 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 646754 11922576 ~ 12025076 (+)
G9913 NA non-coding upstream 15466 11259749 ~ 11260055 (+)
G9909 NA non-coding upstream 22264 11252942 ~ 11253257 (+)
G9905 NA non-coding upstream 35981 11239305 ~ 11239540 (+)
G9903 NA non-coding upstream 40134 11234978 ~ 11235387 (+)
G9869 NA non-coding upstream 72760 11202559 ~ 11202761 (+)
G9929 NA non-coding downstream 14666 11290488 ~ 11290688 (+)
G9934 NA non-coding downstream 22922 11298744 ~ 11298971 (+)
G9935 NA non-coding downstream 24596 11300418 ~ 11301310 (+)
G9895 NA non-coding downstream 37490 11313312 ~ 11314922 (+)
G9953 NA non-coding downstream 61470 11337292 ~ 11338110 (+)
LOC110510920 LOC106574155 other upstream 1283979 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 1815568 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 3019643 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 3045286 8229189 ~ 8231566 (+)
LOC110538561 LOC106574035 other downstream 1962791 13238613 ~ 13295452 (+)
G12410 NA other downstream 2353041 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 2916634 14192456 ~ 14214939 (+)
G13380 NA other downstream 3403528 14679350 ~ 14679578 (+)

Expression


Co-expression Network