Gene
RNA
| Item | Value |
|---|---|
| gene id | G9980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11375423 ~ 11376798 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU11960 | True | 257 | lncRNA | 0.47 | 2 | 11375423 | 11376798 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gipc3 | LOC106574151 | coding | upstream | 1212475 | 10140230 ~ 10162948 (+) |
| lim2.2 | LOC106574149 | coding | upstream | 1267535 | 10104169 ~ 10107888 (+) |
| asb3 | LOC106574148 | coding | upstream | 1273786 | 10096943 ~ 10101637 (+) |
| ftsj3 | ftsj3 | coding | upstream | 1278666 | 10087300 ~ 10096757 (+) |
| LOC110533060 | gnb4 | coding | upstream | 1326746 | 10012701 ~ 10048677 (+) |
| LOC110523899 | LOC106574090 | coding | downstream | 56304 | 11433102 ~ 11514427 (+) |
| LOC110534079 | LOC106574089 | coding | downstream | 287810 | 11664608 ~ 11666692 (+) |
| ccdc50 | ccd50 | coding | downstream | 468921 | 11845719 ~ 11879266 (+) |
| LOC110534540 | LOC106574080 | coding | downstream | 526893 | 11903691 ~ 11906713 (+) |
| LOC110534688 | LOC106573995 | coding | downstream | 545778 | 11922576 ~ 12025076 (+) |
| G9970 | LOC106574093 | non-coding | upstream | 14585 | 11359287 ~ 11360838 (+) |
| G9955 | NA | non-coding | upstream | 31400 | 11343014 ~ 11344023 (+) |
| G9953 | NA | non-coding | upstream | 37313 | 11337292 ~ 11338110 (+) |
| G9895 | NA | non-coding | upstream | 60501 | 11313312 ~ 11314922 (+) |
| G9935 | NA | non-coding | upstream | 74113 | 11300418 ~ 11301310 (+) |
| G10208 | NA | non-coding | downstream | 138387 | 11515185 ~ 11515414 (+) |
| G10223 | NA | non-coding | downstream | 157503 | 11534301 ~ 11534536 (+) |
| G10226 | NA | non-coding | downstream | 160594 | 11537392 ~ 11537763 (+) |
| G10236 | NA | non-coding | downstream | 164941 | 11541739 ~ 11542096 (+) |
| G10241 | NA | non-coding | downstream | 167905 | 11544703 ~ 11544905 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 1383881 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 1915470 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 3119545 | 8255142 ~ 8271732 (+) |
| LOC110501328 | LOC106574178 | other | upstream | 3145188 | 8229189 ~ 8231566 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 1861815 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 2252065 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 2815658 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 3302552 | 14679350 ~ 14679578 (+) |
