Gene
RNA
| Item | Value |
|---|---|
| gene id | G10343 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11645080 ~ 11645703 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposon-derived protein PEG10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12351 | True | 624 | TUCP | 0.41 | 1 | 11645080 | 11645703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533997 | LOC106574092 | coding | downstream | 219114 | 11412825 ~ 11425966 (-) |
| LOC110533913 | LOC106574093 | coding | downstream | 233245 | 11313634 ~ 11411835 (-) |
| LOC118966751 | NA | coding | downstream | 667918 | 10977107 ~ 10977162 (-) |
| LOC110522842 | LOC106574153 | coding | downstream | 1022501 | 10220327 ~ 10622579 (-) |
| LOC110533608 | LOC106574152 | coding | downstream | 1463788 | 10166558 ~ 10181292 (-) |
| LOC110524396 | LOC106574087 | coding | upstream | 153712 | 11799415 ~ 11802397 (-) |
| LOC110534151 | LOC106574088 | coding | upstream | 165005 | 11810708 ~ 11819081 (-) |
| uts2d | uts2b | coding | upstream | 186986 | 11832689 ~ 11834717 (-) |
| LOC110534884 | LOC106573997 | coding | upstream | 400398 | 12042943 ~ 12052746 (-) |
| tab3 | LOC106573999 | coding | upstream | 427376 | 12073079 ~ 12089760 (-) |
| G10333 | NA | non-coding | downstream | 8806 | 11636060 ~ 11636274 (-) |
| G10329 | NA | non-coding | downstream | 12969 | 11631855 ~ 11632111 (-) |
| G10323 | NA | non-coding | downstream | 16061 | 11628715 ~ 11629019 (-) |
| G10318 | NA | non-coding | downstream | 18654 | 11626213 ~ 11626426 (-) |
| G10285 | NA | non-coding | downstream | 64023 | 11580543 ~ 11581057 (-) |
| G10358 | NA | non-coding | upstream | 15076 | 11660779 ~ 11660979 (-) |
| G10375 | NA | non-coding | upstream | 38570 | 11684273 ~ 11684560 (-) |
| G10393 | NA | non-coding | upstream | 57705 | 11703408 ~ 11703698 (-) |
| G10411 | NA | non-coding | upstream | 80156 | 11725859 ~ 11726300 (-) |
| G10418 | NA | non-coding | upstream | 89271 | 11734974 ~ 11735225 (-) |
| G10263 | NA | other | downstream | 81955 | 11562737 ~ 11563125 (-) |
| G8455 | LOC106574127 | other | downstream | 2054494 | 9567941 ~ 9590586 (-) |
| G7965 | NA | other | downstream | 2462046 | 9181455 ~ 9194911 (-) |
| G7985 | NA | other | downstream | 2491133 | 9153270 ~ 9153947 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 3269516 | 8330314 ~ 8419050 (-) |
| G10776 | NA | other | upstream | 210007 | 11855710 ~ 11856390 (-) |
| G10792 | NA | other | upstream | 227402 | 11873105 ~ 11873891 (-) |
| LOC118938491 | NA | other | upstream | 541201 | 12186901 ~ 12205391 (-) |
| G11037 | LOC106574005 | other | upstream | 623817 | 12269520 ~ 12269786 (-) |
| G11194 | NA | other | upstream | 769662 | 12415365 ~ 12415672 (-) |
