G10446


Basic Information

Item Value
gene id G10446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 11777210 ~ 11777560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU12460
gcaccccccacaacaactcgcccaagccttccccatttctccttctcccaaatctgctcagctgatgttctgaatgagctgcaaaatctggacccctacaaatcagctgggctagacaatctggaccctttctttctaaaattatctgccaaaattgttgccacccctattactagcctgttcaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgcggtcatccccctcttcaaagggggtgacactcttgacccaaactgctacagacctatatctatcctaccatgcctttctaaggtcttcgaaagccaagtcaacaaacagattaccgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12460 True 351 lncRNA 0.47 1 11777210 11777560

Neighbor

gene id symbol gene type direction distance location
LOC110534079 LOC106574089 coding upstream 110518 11664608 ~ 11666692 (+)
LOC110523899 LOC106574090 coding upstream 262783 11433102 ~ 11514427 (+)
gipc3 LOC106574151 coding upstream 1614262 10140230 ~ 10162948 (+)
lim2.2 LOC106574149 coding upstream 1669322 10104169 ~ 10107888 (+)
asb3 LOC106574148 coding upstream 1675573 10096943 ~ 10101637 (+)
ccdc50 ccd50 coding downstream 68159 11845719 ~ 11879266 (+)
LOC110534540 LOC106574080 coding downstream 126131 11903691 ~ 11906713 (+)
LOC110534688 LOC106573995 coding downstream 145016 11922576 ~ 12025076 (+)
cpox LOC106573996 coding downstream 260165 12037725 ~ 12043817 (+)
LOC110535080 LOC106574000 coding downstream 279248 12056808 ~ 12072687 (+)
G10441 NA non-coding upstream 8091 11768812 ~ 11769119 (+)
G10414 NA non-coding upstream 45920 11731025 ~ 11731290 (+)
G10381 NA non-coding upstream 85378 11691479 ~ 11691832 (+)
G10348 NA non-coding upstream 127152 11649789 ~ 11650058 (+)
G10342 NA non-coding upstream 131468 11644951 ~ 11645742 (+)
G10452 NA non-coding downstream 10880 11788440 ~ 11788748 (+)
G10455 NA non-coding downstream 12606 11790166 ~ 11790460 (+)
G10431 NA non-coding downstream 19461 11797021 ~ 11797962 (+)
G10428 NA non-coding downstream 20696 11798256 ~ 11799236 (+)
G10500 NA non-coding downstream 76074 11853634 ~ 11853865 (+)
LOC110510920 LOC106574155 other upstream 1785668 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 2317257 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 3521332 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 1461053 13238613 ~ 13295452 (+)
G12410 NA other downstream 1851303 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 2414896 14192456 ~ 14214939 (+)
G13380 NA other downstream 2901790 14679350 ~ 14679578 (+)
G13381 NA other downstream 2902138 14679698 ~ 14680027 (+)

Expression


Co-expression Network