XLOC_019933 (si:ch1073-181h11.1)


Basic Information

Item Value
gene id XLOC_019933
gene name si:ch1073-181h11.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1110855 ~ 1120875 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039767
AACTTCCTTAATTAGTCTATTGTAAACGTGTATCAGTTAGCTGCTGCCTGTTTTTAACAAATACAAAACTGTATGCAAAACTAAAATGTAGTTTTATACGTACTGTACCctaaaatgaatcactttctttTTCTCCATCTTTGTGTGGACAAGTCAGAGCTCGAATTACACCACTGTTATTTTCACTTTCGACTAGAGAGCTTTGCTGGTGAAATGGCGTCGATCTCAGTGAGTGAGCTGAGGATTGTTCTGATTGGGAAGAATGGATCAGAAAACAGCCGAGTGGAAAACGTCATCAAGAGAGGAGCAGCAGCAGTGTATGACAGCGGAGCTTCATCTCATGTCCGGCAGACCGGAATTAATGGACAGGAGAGAAACATCAGAGTCTTCAACATGCCAAACCTGCTCCAGGTTGATCCCCCACAGCAGCAGTTCACAAATAGAGTTAGCATCTACATGGAACAGTTTGCTCCAGGTCCTCATGTGTTCATACTCGTACTGCAGTATAAAGACTTCACTAAGCAGGACAAACACAGAGTTGAAAATGTTCTGAACCTTTTCAGTCAGAAGGCCATCAAACACACTATAGTGCTGACCACTGATGAAGAGACACGCACTGCCAAATTTTCTTCTTATGTAATGAATAGTGCTGTTTATAGTTTAATAAAGGTGTGTAATGGAAGACATGTAAAGTTTGACAGTACACTAGATTATTACTCTAGGTTGTTGAAAATGATCGAGAAAATTCTCATTGAAAGGCATGAAGAATTTGTCATCTGTGACATGTATGGACATGGAGT

Function

symbol description
si:ch1073-181h11.1 Predicted to enable GTP binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101700

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039767 True 800 mRNA 0.40 2 1110855 1120875

Neighbor

gene id symbol gene type direction distance location
XLOC_019932 guca1e coding upstream 1308 1092479 ~ 1109547 (+)
XLOC_019931 camk1ga coding upstream 41448 1049367 ~ 1069407 (+)
XLOC_019930 si:ch73-352p18.4 coding upstream 68099 1028724 ~ 1042756 (+)
XLOC_019929 pparda coding upstream 91703 997838 ~ 1019152 (+)
XLOC_019928 def6b coding upstream 114334 978867 ~ 996521 (+)
XLOC_019934 si:ch1073-181h11.2 coding downstream 2235 1123110 ~ 1130263 (+)
XLOC_019935 GUCA1A coding downstream 17122 1137997 ~ 1146989 (+)
XLOC_019936 irf6 coding downstream 49419 1170294 ~ 1182165 (+)
XLOC_019937 eps8l3a coding downstream 65991 1186866 ~ 1203405 (+)
XLOC_019938 CU570769.1 coding downstream 128913 1249788 ~ 1267820 (+)
XLOC_019927 NA non-coding upstream 172028 923511 ~ 938827 (+)
XLOC_019924 NA non-coding upstream 293228 811600 ~ 817627 (+)
XLOC_019910 NA non-coding upstream 801651 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 823666 219167 ~ 287189 (+)
XLOC_019903 NA non-coding upstream 1054115 53914 ~ 56740 (+)
XLOC_019944 NA non-coding downstream 195877 1316752 ~ 1364861 (+)
XLOC_019947 BX322657.1 non-coding downstream 256456 1377331 ~ 1384069 (+)
XLOC_019963 AL954741.1 non-coding downstream 455988 1576863 ~ 1577746 (+)
XLOC_019970 BX649416.2 non-coding downstream 529253 1650128 ~ 1653938 (+)

Expression


Co-expression Network