Gene
RNA
| Item | Value |
|---|---|
| gene id | G10787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 11871719 ~ 11871972 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| coiled-coil domain-containing protein 50 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU12861 | True | 254 | lncRNA | 0.48 | 1 | 11871719 | 11871972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| uts2d | uts2b | coding | downstream | 37002 | 11832689 ~ 11834717 (-) |
| LOC110534151 | LOC106574088 | coding | downstream | 52638 | 11810708 ~ 11819081 (-) |
| LOC110524396 | LOC106574087 | coding | downstream | 69322 | 11799415 ~ 11802397 (-) |
| LOC110533997 | LOC106574092 | coding | downstream | 445753 | 11412825 ~ 11425966 (-) |
| LOC110533913 | LOC106574093 | coding | downstream | 459884 | 11313634 ~ 11411835 (-) |
| LOC110534884 | LOC106573997 | coding | upstream | 174129 | 12042943 ~ 12052746 (-) |
| tab3 | LOC106573999 | coding | upstream | 201107 | 12073079 ~ 12089760 (-) |
| LOC118938491 | NA | coding | upstream | 314929 | 12186901 ~ 12205391 (-) |
| LOC110535561 | LOC106574006 | coding | upstream | 440734 | 12312706 ~ 12335747 (-) |
| LOC118938690 | NA | coding | upstream | 441786 | 12313758 ~ 12315324 (-) |
| G10725 | NA | non-coding | downstream | 92654 | 11778838 ~ 11779065 (-) |
| G10719 | NA | non-coding | downstream | 96438 | 11775073 ~ 11775281 (-) |
| G10718 | NA | non-coding | downstream | 102614 | 11768729 ~ 11769105 (-) |
| G10707 | NA | non-coding | downstream | 113850 | 11757539 ~ 11757869 (-) |
| G10791 | NA | non-coding | upstream | 527 | 11872499 ~ 11872757 (-) |
| G10783 | NA | non-coding | upstream | 3073 | 11875045 ~ 11877997 (-) |
| G10784 | NA | non-coding | upstream | 7584 | 11879556 ~ 11881671 (-) |
| G10794 | NA | non-coding | upstream | 16765 | 11888737 ~ 11889184 (-) |
| G10795 | NA | non-coding | upstream | 17768 | 11889740 ~ 11889992 (-) |
| G10776 | NA | other | downstream | 15329 | 11855710 ~ 11856390 (-) |
| G10343 | NA | other | downstream | 226016 | 11645080 ~ 11645703 (-) |
| G10263 | NA | other | downstream | 308594 | 11562737 ~ 11563125 (-) |
| G8455 | LOC106574127 | other | downstream | 2281133 | 9567941 ~ 9590586 (-) |
| G7965 | NA | other | downstream | 2688685 | 9181455 ~ 9194911 (-) |
| G10792 | NA | other | upstream | 1133 | 11873105 ~ 11873891 (-) |
| G11037 | LOC106574005 | other | upstream | 397548 | 12269520 ~ 12269786 (-) |
| G11194 | NA | other | upstream | 543393 | 12415365 ~ 12415672 (-) |
| G12173 | LOC106574030 | other | upstream | 1347865 | 13219837 ~ 13220334 (-) |
