XLOC_019934 (si:ch1073-181h11.2)


Basic Information

Item Value
gene id XLOC_019934
gene name si:ch1073-181h11.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1123110 ~ 1130263 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039768
CATCATTCCTGAAGAAGCTCCTCTCAATAATGAAGACAGAGCAGAAATGGAGAAGATGCAGAAGATATTCAGCTCCAGACTCAACAAGCACATGATGATCCTCATACAGCAGGACTCAGAGCTTCATACAGCAGAACTCAGTGAAGAAACTCAGGCTGTTATTCAGAGTTTTGGAGAACAACATTATTTCATCAGCCCAAACACACCAGTGTCCACATTAATGGAGAAGATTGAGCAGATGGTGGAAGAAAACAAAGGACAGGTTTTCTCCACAGAGACATTTCTGGAGCTGCAGATGGAGAAACTGCTCAAGCATGATGAAATGAAGAGAACAATCCACAAGTTAGAGACATTGTTTCAGTCACAAGATTCAAGTGAAAGTGAAGATGACCTGAGGATTGTTCTTCTGGGTAAAACTGGAGTTGGGAAGAGTGCAACTGGAAACACCATCTTAGGGAGAAAAGAATTTAAATCAGACATCTCTCAAAGCTCTGTTACGAATGTGTGCCAGAAACAAACAGCTGAAATCAATGGCCGACACATCACTGTGATCGACACTCCAGGACTGTTTGACACTAAACTCAGTAATGAAGAAATCAAGAGAGAAATCAGCAACTGCATCTCCATGATCCTGCCTGGACCTCACGTGTT
>TCONS_00039769
ATGGGTTGGtatactgttttttttttattttcacttctaGATTCAAGTGAAAGTGAAGATGACCTGAGGATTGTTCTTCTGGGTAAAACTGGAGTTGGGAAGAGTGCAACTGGAAACACCATCTTAGGGAGAAAAGAATTTAAATCAGACATCTCTCAAAGCTCTGTTACGAATGTGTGCCAGAAACAAACAGCTGAAATCAATGGCCGACACATCACTGTGATCGACACTCCAGGACTGTTTGACACTAAACTCAGTAATGAAGAAATCAAGAGAGAAATCAGCAACTGCATCTCCATGATCCTGCCTGGACCTCACGTGTTTCTGCTGCTGATTTCACTGGGAAGATTCACTCAAGAAGAGGAAAAATCTGTGAAAAAGAGAAATCAGATCTGGAGAAACAGAAGGAGGAGGCTCAGAAACAGGCAGATCTGGAGAAACAGATGA

Function

symbol description
si:ch1073-181h11.2 Predicted to enable GTP binding activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103883

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039768 False 651 mRNA 0.42 2 1123110 1127794
TCONS_00039769 True 447 mRNA 0.41 3 1123873 1130263

Neighbor

gene id symbol gene type direction distance location
XLOC_019933 si:ch1073-181h11.1 coding upstream 2235 1110855 ~ 1120875 (+)
XLOC_019932 guca1e coding upstream 13563 1092479 ~ 1109547 (+)
XLOC_019931 camk1ga coding upstream 53703 1049367 ~ 1069407 (+)
XLOC_019930 si:ch73-352p18.4 coding upstream 80354 1028724 ~ 1042756 (+)
XLOC_019929 pparda coding upstream 103958 997838 ~ 1019152 (+)
XLOC_019935 GUCA1A coding downstream 7734 1137997 ~ 1146989 (+)
XLOC_019936 irf6 coding downstream 40031 1170294 ~ 1182165 (+)
XLOC_019937 eps8l3a coding downstream 56603 1186866 ~ 1203405 (+)
XLOC_019938 CU570769.1 coding downstream 119525 1249788 ~ 1267820 (+)
XLOC_019939 si:ch73-138e16.2 coding downstream 146417 1276680 ~ 1282346 (+)
XLOC_019927 NA non-coding upstream 184283 923511 ~ 938827 (+)
XLOC_019924 NA non-coding upstream 305483 811600 ~ 817627 (+)
XLOC_019910 NA non-coding upstream 813906 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 835921 219167 ~ 287189 (+)
XLOC_019903 NA non-coding upstream 1066370 53914 ~ 56740 (+)
XLOC_019944 NA non-coding downstream 186489 1316752 ~ 1364861 (+)
XLOC_019947 BX322657.1 non-coding downstream 247068 1377331 ~ 1384069 (+)
XLOC_019963 AL954741.1 non-coding downstream 446600 1576863 ~ 1577746 (+)
XLOC_019970 BX649416.2 non-coding downstream 519865 1650128 ~ 1653938 (+)

Expression


Co-expression Network