G10922


Basic Information

Item Value
gene id G10922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12108255 ~ 12108896 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13005
agttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagaaggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttggaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13005 True 642 lncRNA 0.46 1 12108255 12108896

Neighbor

gene id symbol gene type direction distance location
tab3 LOC106573999 coding downstream 18495 12073079 ~ 12089760 (-)
LOC110534884 LOC106573997 coding downstream 55509 12042943 ~ 12052746 (-)
uts2d uts2b coding downstream 273538 11832689 ~ 11834717 (-)
LOC110534151 LOC106574088 coding downstream 289174 11810708 ~ 11819081 (-)
LOC110524396 LOC106574087 coding downstream 305858 11799415 ~ 11802397 (-)
LOC118938491 NA coding upstream 78005 12186901 ~ 12205391 (-)
LOC110535561 LOC106574006 coding upstream 203810 12312706 ~ 12335747 (-)
LOC118938690 NA coding upstream 204862 12313758 ~ 12315324 (-)
LOC110525281 rnf220 coding upstream 233967 12342863 ~ 12395322 (-)
LOC110535719 dmap1 coding upstream 343608 12452504 ~ 12460292 (-)
G10835 LOC106574000 non-coding downstream 35574 12069609 ~ 12072681 (-)
G10871 NA non-coding downstream 108816 11998493 ~ 11999439 (-)
G10806 NA non-coding downstream 208582 11899466 ~ 11899673 (-)
G10800 NA non-coding downstream 215231 11892824 ~ 11893024 (-)
G10923 NA non-coding upstream 142 12109038 ~ 12109576 (-)
G10925 NA non-coding upstream 2324 12111220 ~ 12111518 (-)
G10953 LOC106574001 non-coding upstream 36183 12145079 ~ 12146085 (-)
G10988 NA non-coding upstream 122333 12231229 ~ 12231443 (-)
G10792 NA other downstream 234364 11873105 ~ 11873891 (-)
G10776 NA other downstream 251865 11855710 ~ 11856390 (-)
G10343 NA other downstream 462552 11645080 ~ 11645703 (-)
G10263 NA other downstream 545130 11562737 ~ 11563125 (-)
G8455 LOC106574127 other downstream 2517669 9567941 ~ 9590586 (-)
G11037 LOC106574005 other upstream 160624 12269520 ~ 12269786 (-)
G11194 NA other upstream 306469 12415365 ~ 12415672 (-)
G12173 LOC106574030 other upstream 1110941 13219837 ~ 13220334 (-)
G12196 NA other upstream 1184509 13293405 ~ 13295453 (-)

Expression


Co-expression Network