G11140


Basic Information

Item Value
gene id G11140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12437565 ~ 12437794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13243
gattgcaatagatacgccgcattttggtccgactctccttctcaccaagaaaaccgttacagaatcacccaccaccaacggaccaagcagcgtgtcaacaggcaggagcagcgcgaggagaagcgcaataaggatttctggacatgggaggaaatcctcgacgggagaggaccctgggctaaaccaggggagtgtagccgcactaaggtgcagcgggagaagaaacaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13243 True 230 lncRNA 0.40 1 12437565 12437794

Neighbor

gene id symbol gene type direction distance location
LOC110525067 LOC106574005 coding upstream 124926 12257968 ~ 12312639 (+)
LOC110535487 NA coding upstream 184034 12250169 ~ 12253531 (+)
mindy4 fam188b coding upstream 272393 12154422 ~ 12165172 (+)
LOC110535183 LOC106574001 coding upstream 290229 12115086 ~ 12147336 (+)
LOC110535080 LOC106574000 coding upstream 364878 12056808 ~ 12072687 (+)
armh1 cssa16h1orf228 coding downstream 23573 12460957 ~ 12473058 (+)
LOC110536107 LOC106574012 coding downstream 46892 12484686 ~ 12496762 (+)
LOC110536612 LOC106574016 coding downstream 238939 12676733 ~ 12695295 (+)
LOC110536795 tnni3k coding downstream 264879 12702673 ~ 12765497 (+)
LOC110536960 LOC106613985 coding downstream 352413 12790207 ~ 12802143 (+)
G11137 NA non-coding upstream 3052 12433464 ~ 12434513 (+)
G11130 NA non-coding upstream 21533 12415311 ~ 12416032 (+)
G11127 NA non-coding upstream 26729 12410597 ~ 12410836 (+)
G11103 NA non-coding upstream 78112 12359227 ~ 12359453 (+)
G11102 NA non-coding upstream 78714 12358531 ~ 12358851 (+)
G11422 NA non-coding downstream 431604 12869398 ~ 12870186 (+)
G11475 NA non-coding downstream 501019 12938813 ~ 12939019 (+)
G11494 NA non-coding downstream 524766 12962560 ~ 13002364 (+)
G11500 NA non-coding downstream 535898 12973692 ~ 12998589 (+)
LOC110523899 LOC106574090 other upstream 923183 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 2276279 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 2446023 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 2977612 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4181687 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 800819 13238613 ~ 13295452 (+)
G12410 NA other downstream 1191069 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1754662 14192456 ~ 14214939 (+)
G13380 NA other downstream 2241556 14679350 ~ 14679578 (+)
G13381 NA other downstream 2241904 14679698 ~ 14680027 (+)

Expression


Co-expression Network