Gene
RNA
| Item | Value |
|---|---|
| gene id | G11422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 12869398 ~ 12870186 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU13543 | True | 451 | lncRNA | 0.43 | 3 | 12869398 | 12870186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536960 | LOC106613985 | coding | upstream | 67255 | 12790207 ~ 12802143 (+) |
| LOC110536795 | tnni3k | coding | upstream | 103901 | 12702673 ~ 12765497 (+) |
| LOC110536612 | LOC106574016 | coding | upstream | 174103 | 12676733 ~ 12695295 (+) |
| LOC110536107 | LOC106574012 | coding | upstream | 372636 | 12484686 ~ 12496762 (+) |
| armh1 | cssa16h1orf228 | coding | upstream | 396340 | 12460957 ~ 12473058 (+) |
| LOC110537039 | LOC106574022 | coding | downstream | 25228 | 12895414 ~ 12934612 (+) |
| ptgfr | ptgfr | coding | downstream | 141353 | 13011539 ~ 13016203 (+) |
| btf3l4 | LOC105028135 | coding | downstream | 164175 | 13034361 ~ 13047924 (+) |
| zfyve9b | LOC106574024 | coding | downstream | 178255 | 13048441 ~ 13062930 (+) |
| LOC110537958 | LOC106574029 | coding | downstream | 223488 | 13093674 ~ 13104588 (+) |
| G11140 | NA | non-coding | upstream | 431604 | 12437565 ~ 12437794 (+) |
| G11137 | NA | non-coding | upstream | 434885 | 12433464 ~ 12434513 (+) |
| G11130 | NA | non-coding | upstream | 453366 | 12415311 ~ 12416032 (+) |
| G11127 | NA | non-coding | upstream | 458562 | 12410597 ~ 12410836 (+) |
| G11475 | NA | non-coding | downstream | 68627 | 12938813 ~ 12939019 (+) |
| G11494 | NA | non-coding | downstream | 92374 | 12962560 ~ 13002364 (+) |
| G11500 | NA | non-coding | downstream | 103506 | 12973692 ~ 12998589 (+) |
| G11539 | NA | non-coding | downstream | 173649 | 13043835 ~ 13044050 (+) |
| G11574 | NA | non-coding | downstream | 281818 | 13152004 ~ 13152991 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 1355016 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 2708112 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 2877856 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 3409445 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 4613520 | 8255142 ~ 8271732 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 368427 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 758677 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 1322270 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 1809164 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1809512 | 14679698 ~ 14680027 (+) |
