G11475


Basic Information

Item Value
gene id G11475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12938813 ~ 12939019 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13598
ggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaatagccatcaccagccagctaccacccagttactcaaccctgcaccttagaggctgctgccatatatacatagacatggaatcactggtcacttcaataatgtttacatactgctttacccatttaatatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13598 True 207 lncRNA 0.42 1 12938813 12939019

Neighbor

gene id symbol gene type direction distance location
LOC110537039 LOC106574022 coding upstream 4201 12895414 ~ 12934612 (+)
LOC110536960 LOC106613985 coding upstream 136670 12790207 ~ 12802143 (+)
LOC110536795 tnni3k coding upstream 173316 12702673 ~ 12765497 (+)
LOC110536612 LOC106574016 coding upstream 243518 12676733 ~ 12695295 (+)
LOC110536107 LOC106574012 coding upstream 442051 12484686 ~ 12496762 (+)
ptgfr ptgfr coding downstream 72520 13011539 ~ 13016203 (+)
btf3l4 LOC105028135 coding downstream 95342 13034361 ~ 13047924 (+)
zfyve9b LOC106574024 coding downstream 109422 13048441 ~ 13062930 (+)
LOC110537958 LOC106574029 coding downstream 154655 13093674 ~ 13104588 (+)
mknk1 LOC106574026 coding downstream 165485 13104504 ~ 13115472 (+)
G11422 NA non-coding upstream 68627 12869398 ~ 12870186 (+)
armh1 cssa16h1orf228 non-coding upstream 472481 12460957 ~ 12473058 (+)
G11140 NA non-coding upstream 501019 12437565 ~ 12437794 (+)
G11137 NA non-coding upstream 504300 12433464 ~ 12434513 (+)
G11130 NA non-coding upstream 522781 12415311 ~ 12416032 (+)
G11494 NA non-coding downstream 23541 12962560 ~ 13002364 (+)
G11500 NA non-coding downstream 34673 12973692 ~ 12998589 (+)
G11539 NA non-coding downstream 104816 13043835 ~ 13044050 (+)
G11574 NA non-coding downstream 212985 13152004 ~ 13152991 (+)
G11586 NA non-coding downstream 242793 13181812 ~ 13182548 (+)
LOC110523899 LOC106574090 other upstream 1424431 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 2777527 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 2947271 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 3478860 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4682935 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 299594 13238613 ~ 13295452 (+)
G12410 NA other downstream 689844 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1253437 14192456 ~ 14214939 (+)
G13380 NA other downstream 1740331 14679350 ~ 14679578 (+)
G13381 NA other downstream 1740679 14679698 ~ 14680027 (+)

Expression


Co-expression Network