Gene
RNA
| Item | Value |
|---|---|
| gene id | G11494 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 12962560 ~ 13002364 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ribosomal protein S6 kinase beta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU13617 | True | 244 | lncRNA | 0.46 | 2 | 12962560 | 13002364 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537039 | LOC106574022 | coding | upstream | 27948 | 12895414 ~ 12934612 (+) |
| LOC110536960 | LOC106613985 | coding | upstream | 160417 | 12790207 ~ 12802143 (+) |
| LOC110536795 | tnni3k | coding | upstream | 197063 | 12702673 ~ 12765497 (+) |
| LOC110536612 | LOC106574016 | coding | upstream | 267265 | 12676733 ~ 12695295 (+) |
| LOC110536107 | LOC106574012 | coding | upstream | 465798 | 12484686 ~ 12496762 (+) |
| ptgfr | ptgfr | coding | downstream | 9175 | 13011539 ~ 13016203 (+) |
| btf3l4 | LOC105028135 | coding | downstream | 31997 | 13034361 ~ 13047924 (+) |
| zfyve9b | LOC106574024 | coding | downstream | 46077 | 13048441 ~ 13062930 (+) |
| LOC110537958 | LOC106574029 | coding | downstream | 91310 | 13093674 ~ 13104588 (+) |
| mknk1 | LOC106574026 | coding | downstream | 102140 | 13104504 ~ 13115472 (+) |
| G11475 | NA | non-coding | upstream | 23541 | 12938813 ~ 12939019 (+) |
| G11422 | NA | non-coding | upstream | 92374 | 12869398 ~ 12870186 (+) |
| armh1 | cssa16h1orf228 | non-coding | upstream | 496228 | 12460957 ~ 12473058 (+) |
| G11140 | NA | non-coding | upstream | 524766 | 12437565 ~ 12437794 (+) |
| G11137 | NA | non-coding | upstream | 528047 | 12433464 ~ 12434513 (+) |
| G11539 | NA | non-coding | downstream | 41471 | 13043835 ~ 13044050 (+) |
| G11574 | NA | non-coding | downstream | 149640 | 13152004 ~ 13152991 (+) |
| G11586 | NA | non-coding | downstream | 179448 | 13181812 ~ 13182548 (+) |
| G11999 | NA | non-coding | downstream | 208100 | 13210464 ~ 13210813 (+) |
| G12000 | NA | non-coding | downstream | 208744 | 13211108 ~ 13211689 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 1448178 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 2801274 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 2971018 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 3502607 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 4706682 | 8255142 ~ 8271732 (+) |
| LOC110538561 | LOC106574035 | other | downstream | 236249 | 13238613 ~ 13295452 (+) |
| G12410 | NA | other | downstream | 626499 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 1190092 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 1676986 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1677334 | 14679698 ~ 14680027 (+) |
