G11500


Basic Information

Item Value
gene id G11500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 12973692 ~ 12998589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13626
gtgtcagtgtatatcaatcaaatttattttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgaagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13626 True 202 lncRNA 0.38 2 12973692 12998589

Neighbor

gene id symbol gene type direction distance location
LOC110537039 LOC106574022 coding upstream 39080 12895414 ~ 12934612 (+)
LOC110536960 LOC106613985 coding upstream 171549 12790207 ~ 12802143 (+)
LOC110536795 tnni3k coding upstream 208195 12702673 ~ 12765497 (+)
LOC110536612 LOC106574016 coding upstream 278397 12676733 ~ 12695295 (+)
LOC110536107 LOC106574012 coding upstream 476930 12484686 ~ 12496762 (+)
ptgfr ptgfr coding downstream 12950 13011539 ~ 13016203 (+)
btf3l4 LOC105028135 coding downstream 35772 13034361 ~ 13047924 (+)
zfyve9b LOC106574024 coding downstream 49852 13048441 ~ 13062930 (+)
LOC110537958 LOC106574029 coding downstream 95085 13093674 ~ 13104588 (+)
mknk1 LOC106574026 coding downstream 105915 13104504 ~ 13115472 (+)
G11475 NA non-coding upstream 34673 12938813 ~ 12939019 (+)
G11422 NA non-coding upstream 103506 12869398 ~ 12870186 (+)
armh1 cssa16h1orf228 non-coding upstream 507360 12460957 ~ 12473058 (+)
G11140 NA non-coding upstream 535898 12437565 ~ 12437794 (+)
G11137 NA non-coding upstream 539179 12433464 ~ 12434513 (+)
G11539 NA non-coding downstream 45246 13043835 ~ 13044050 (+)
G11574 NA non-coding downstream 153415 13152004 ~ 13152991 (+)
G11586 NA non-coding downstream 183223 13181812 ~ 13182548 (+)
G11999 NA non-coding downstream 211875 13210464 ~ 13210813 (+)
G12000 NA non-coding downstream 212519 13211108 ~ 13211689 (+)
LOC110523899 LOC106574090 other upstream 1459310 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 2812406 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 2982150 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 3513739 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4717814 8255142 ~ 8271732 (+)
LOC110538561 LOC106574035 other downstream 240024 13238613 ~ 13295452 (+)
G12410 NA other downstream 630274 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1193867 14192456 ~ 14214939 (+)
G13380 NA other downstream 1680761 14679350 ~ 14679578 (+)
G13381 NA other downstream 1681109 14679698 ~ 14680027 (+)

Expression


Co-expression Network