G11586


Basic Information

Item Value
gene id G11586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13181812 ~ 13182548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU13715
gatggtctggtaatagaagctgttcaacagtccgatggtctggtaatagaagctgttcatcagtctgatggtaatagaagctgttcatcagtctgatggtaatagaagctgttcatcagtctgatggtaatagaagctgttcaacagtctgatggtaatagaagctgttcaacagtctgatggtaatagaagctgttcaacagtctgatggtaatagaagctgttcatcagtctgatggtaatagaagctgttcaacagtctgatggtaatagaagctgttcaacagtctcatgtcctggtaatagaagctgttttttagtctctctgtCTGCACCTGTGCTGTCTCCGTCTGTCGGACGGTAGCCAAGTGAACAATCCATGGCTCGAGTGGCTGAGGTCCTTAATGAtcttggccttcctttgacactgggtgctgtagatgtcctgtagGGATGAcagtgtgcccctggtgatgcattgggctgcccgcaccaccctttggagagccttacggttgagggcgtaGCAGTTacaataccaggcagtgatacagcccaacagaatGCCCTCAATGGtgtatctgtagaagtttgtgagggtcatAGGGGCCAAGcctaaatttcttcagcctcctaatgttgaagaggcgctgttgcaccttcttcaccatgctgtctgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13715 True 681 lncRNA 0.52 2 13181812 13182548

Neighbor

gene id symbol gene type direction distance location
LOC110538273 LOC106574027 coding upstream 63449 13117319 ~ 13118363 (+)
mknk1 LOC106574026 coding upstream 66340 13104504 ~ 13115472 (+)
LOC110537958 LOC106574029 coding upstream 77224 13093674 ~ 13104588 (+)
zfyve9b LOC106574024 coding upstream 118882 13048441 ~ 13062930 (+)
btf3l4 LOC105028135 coding upstream 133888 13034361 ~ 13047924 (+)
LOC110526761 LOC106574030 coding downstream 32223 13214771 ~ 13223903 (+)
LOC110538561 LOC106574035 coding downstream 77363 13238613 ~ 13295452 (+)
LOC110485223 LOC106574083 coding downstream 226734 13409282 ~ 13411290 (+)
LOC110485322 LOC106574039 coding downstream 243018 13425566 ~ 13431117 (+)
pdzk1ip1 LOC106574040 coding downstream 253468 13436016 ~ 13441528 (+)
G11574 NA non-coding upstream 28821 13152004 ~ 13152991 (+)
G11539 NA non-coding upstream 137762 13043835 ~ 13044050 (+)
G11494 NA non-coding upstream 179448 12962560 ~ 13002364 (+)
G11500 NA non-coding upstream 183223 12973692 ~ 12998589 (+)
G11475 NA non-coding upstream 242793 12938813 ~ 12939019 (+)
G11999 NA non-coding downstream 27916 13210464 ~ 13210813 (+)
G12000 NA non-coding downstream 28560 13211108 ~ 13211689 (+)
G12007 NA non-coding downstream 47227 13229775 ~ 13231234 (+)
G12015 NA non-coding downstream 59418 13241966 ~ 13242503 (+)
LOC110523899 LOC106574090 other upstream 1667430 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3020526 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3190270 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 3721859 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4925934 8255142 ~ 8271732 (+)
G12410 NA other downstream 446315 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 1009908 14192456 ~ 14214939 (+)
G13380 NA other downstream 1496802 14679350 ~ 14679578 (+)
G13381 NA other downstream 1497150 14679698 ~ 14680027 (+)

Expression


Co-expression Network