G11999


Basic Information

Item Value
gene id G11999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13210464 ~ 13210813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU14193
aatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccattgcaaaacaagcatttgtgtaacagtattgatggctaacgtagcatttagtgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaataaaataatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaaaccctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14193 True 350 lncRNA 0.38 1 13210464 13210813

Neighbor

gene id symbol gene type direction distance location
LOC110538273 LOC106574027 coding upstream 92101 13117319 ~ 13118363 (+)
mknk1 LOC106574026 coding upstream 94992 13104504 ~ 13115472 (+)
LOC110537958 LOC106574029 coding upstream 105876 13093674 ~ 13104588 (+)
zfyve9b LOC106574024 coding upstream 147534 13048441 ~ 13062930 (+)
btf3l4 LOC105028135 coding upstream 162540 13034361 ~ 13047924 (+)
LOC110526761 LOC106574030 coding downstream 3958 13214771 ~ 13223903 (+)
LOC110538561 LOC106574035 coding downstream 49098 13238613 ~ 13295452 (+)
LOC110485223 LOC106574083 coding downstream 198469 13409282 ~ 13411290 (+)
LOC110485322 LOC106574039 coding downstream 214753 13425566 ~ 13431117 (+)
pdzk1ip1 LOC106574040 coding downstream 225203 13436016 ~ 13441528 (+)
G11586 NA non-coding upstream 27916 13181812 ~ 13182548 (+)
G11574 NA non-coding upstream 57473 13152004 ~ 13152991 (+)
G11539 NA non-coding upstream 166414 13043835 ~ 13044050 (+)
G11494 NA non-coding upstream 208100 12962560 ~ 13002364 (+)
G11500 NA non-coding upstream 211875 12973692 ~ 12998589 (+)
G12000 NA non-coding downstream 295 13211108 ~ 13211689 (+)
G12007 NA non-coding downstream 18962 13229775 ~ 13231234 (+)
G12015 NA non-coding downstream 31153 13241966 ~ 13242503 (+)
G12014 NA non-coding downstream 38331 13249144 ~ 13253879 (+)
LOC110523899 LOC106574090 other upstream 1696082 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3049178 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3218922 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 3750511 9450932 ~ 9460358 (+)
LOC110505168 LOC106574179 other upstream 4954586 8255142 ~ 8271732 (+)
G12410 NA other downstream 418050 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 981643 14192456 ~ 14214939 (+)
G13380 NA other downstream 1468537 14679350 ~ 14679578 (+)
G13381 NA other downstream 1468885 14679698 ~ 14680027 (+)

Expression


Co-expression Network