G12029


Basic Information

Item Value
gene id G12029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13285242 ~ 13285464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU14229
aagacatcaaaactatgaaataacacatggaatcatgtagtagccaaacaattgttaaacaaatctaaatatatttgagattcttcaaagtagccaccctttgccttgatgacagttttgcacactcttggcattctctcaaccagcttcacctggaaggcttttccaacagtcttgaaggagttcccattaCTGacacagcaaagcacccccactccattac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14229 True 223 lncRNA 0.46 1 13285242 13285464

Neighbor

gene id symbol gene type direction distance location
LOC110526761 LOC106574030 coding upstream 61339 13214771 ~ 13223903 (+)
LOC110538273 LOC106574027 coding upstream 166879 13117319 ~ 13118363 (+)
mknk1 LOC106574026 coding upstream 169770 13104504 ~ 13115472 (+)
LOC110537958 LOC106574029 coding upstream 180654 13093674 ~ 13104588 (+)
zfyve9b LOC106574024 coding upstream 222312 13048441 ~ 13062930 (+)
LOC110485223 LOC106574083 coding downstream 123818 13409282 ~ 13411290 (+)
LOC110485322 LOC106574039 coding downstream 140102 13425566 ~ 13431117 (+)
pdzk1ip1 LOC106574040 coding downstream 150552 13436016 ~ 13441528 (+)
tm2d1 LOC106574044 coding downstream 449299 13734763 ~ 13753675 (+)
LOC110508285 LOC106574085 coding downstream 855032 14140496 ~ 14144946 (+)
G12014 NA non-coding upstream 31363 13249144 ~ 13253879 (+)
G12015 NA non-coding upstream 42739 13241966 ~ 13242503 (+)
G12007 NA non-coding upstream 54008 13229775 ~ 13231234 (+)
G12000 NA non-coding upstream 73553 13211108 ~ 13211689 (+)
G12030 NA non-coding downstream 34 13285498 ~ 13285793 (+)
G12034 NA non-coding downstream 5263 13290727 ~ 13290927 (+)
G12035 NA non-coding downstream 5973 13291437 ~ 13291691 (+)
G12009 NA non-coding downstream 10109 13295573 ~ 13296966 (+)
G12010 NA non-coding downstream 11659 13297123 ~ 13298116 (+)
LOC110538561 LOC106574035 other upstream 25246 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 1770860 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3123956 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3293700 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 3825289 9450932 ~ 9460358 (+)
G12410 NA other downstream 343399 13617059 ~ 13666871 (+)
LOC110486057 NA other downstream 906992 14192456 ~ 14214939 (+)
G13380 NA other downstream 1393886 14679350 ~ 14679578 (+)
G13381 NA other downstream 1394234 14679698 ~ 14680027 (+)
G13391 NA other downstream 1414712 14700176 ~ 14700730 (+)

Expression


Co-expression Network