Gene
RNA
| Item | Value |
|---|---|
| gene id | G12126 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13448264 ~ 13448757 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14351 | True | 247 | lncRNA | 0.48 | 2 | 13448264 | 13448757 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdzk1ip1 | LOC106574040 | coding | upstream | 6736 | 13436016 ~ 13441528 (+) |
| LOC110485322 | LOC106574039 | coding | upstream | 17147 | 13425566 ~ 13431117 (+) |
| LOC110485223 | LOC106574083 | coding | upstream | 36974 | 13409282 ~ 13411290 (+) |
| LOC110538561 | LOC106574035 | coding | upstream | 152812 | 13238613 ~ 13295452 (+) |
| LOC110526761 | LOC106574030 | coding | upstream | 224361 | 13214771 ~ 13223903 (+) |
| tm2d1 | LOC106574044 | coding | downstream | 286006 | 13734763 ~ 13753675 (+) |
| LOC110508285 | LOC106574085 | coding | downstream | 691739 | 14140496 ~ 14144946 (+) |
| LOC110485648 | LOC106574045 | coding | downstream | 713628 | 14162385 ~ 14171600 (+) |
| LOC110485979 | LOC106574047 | coding | downstream | 723762 | 14172519 ~ 14185257 (+) |
| LOC110486057 | NA | coding | downstream | 743710 | 14192456 ~ 14214939 (+) |
| G12039 | NA | non-coding | upstream | 145027 | 13303018 ~ 13303237 (+) |
| G12037 | NA | non-coding | upstream | 147415 | 13300630 ~ 13300849 (+) |
| G12010 | NA | non-coding | upstream | 150148 | 13297123 ~ 13298116 (+) |
| G12009 | NA | non-coding | upstream | 151298 | 13295573 ~ 13296966 (+) |
| G12035 | NA | non-coding | upstream | 156573 | 13291437 ~ 13291691 (+) |
| G12137 | NA | non-coding | downstream | 27146 | 13475903 ~ 13477133 (+) |
| G12332 | NA | non-coding | downstream | 85187 | 13533944 ~ 13534149 (+) |
| G12335 | NA | non-coding | downstream | 87356 | 13536113 ~ 13536354 (+) |
| G12342 | NA | non-coding | downstream | 92696 | 13541453 ~ 13541669 (+) |
| G12353 | NA | non-coding | downstream | 98145 | 13546902 ~ 13547117 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 1933882 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 3286978 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 3456722 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 3988311 | 9450932 ~ 9460358 (+) |
| G12410 | NA | other | downstream | 180106 | 13617059 ~ 13666871 (+) |
| G13380 | NA | other | downstream | 1230593 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1230941 | 14679698 ~ 14680027 (+) |
| G13391 | NA | other | downstream | 1251419 | 14700176 ~ 14700730 (+) |
