Gene
RNA
| Item | Value |
|---|---|
| gene id | G12335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13536113 ~ 13536354 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14596 | True | 242 | lncRNA | 0.42 | 1 | 13536113 | 13536354 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdzk1ip1 | LOC106574040 | coding | upstream | 94585 | 13436016 ~ 13441528 (+) |
| LOC110485322 | LOC106574039 | coding | upstream | 104996 | 13425566 ~ 13431117 (+) |
| LOC110485223 | LOC106574083 | coding | upstream | 124823 | 13409282 ~ 13411290 (+) |
| LOC110538561 | LOC106574035 | coding | upstream | 240661 | 13238613 ~ 13295452 (+) |
| LOC110526761 | LOC106574030 | coding | upstream | 312210 | 13214771 ~ 13223903 (+) |
| tm2d1 | LOC106574044 | coding | downstream | 198409 | 13734763 ~ 13753675 (+) |
| LOC110508285 | LOC106574085 | coding | downstream | 604142 | 14140496 ~ 14144946 (+) |
| LOC110485648 | LOC106574045 | coding | downstream | 626031 | 14162385 ~ 14171600 (+) |
| LOC110485979 | LOC106574047 | coding | downstream | 636165 | 14172519 ~ 14185257 (+) |
| LOC110486057 | NA | coding | downstream | 656113 | 14192456 ~ 14214939 (+) |
| G12332 | NA | non-coding | upstream | 1964 | 13533944 ~ 13534149 (+) |
| G12137 | NA | non-coding | upstream | 58980 | 13475903 ~ 13477133 (+) |
| G12126 | NA | non-coding | upstream | 87356 | 13448264 ~ 13448757 (+) |
| G12039 | NA | non-coding | upstream | 232876 | 13303018 ~ 13303237 (+) |
| G12037 | NA | non-coding | upstream | 235264 | 13300630 ~ 13300849 (+) |
| G12342 | NA | non-coding | downstream | 5099 | 13541453 ~ 13541669 (+) |
| G12353 | NA | non-coding | downstream | 10548 | 13546902 ~ 13547117 (+) |
| G12356 | NA | non-coding | downstream | 11873 | 13548227 ~ 13548458 (+) |
| G12357 | NA | non-coding | downstream | 12367 | 13548721 ~ 13548986 (+) |
| G12363 | NA | non-coding | downstream | 17272 | 13553626 ~ 13553867 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 2021731 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 3374827 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 3544571 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 4076160 | 9450932 ~ 9460358 (+) |
| G12410 | NA | other | downstream | 92509 | 13617059 ~ 13666871 (+) |
| G13380 | NA | other | downstream | 1142996 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1143344 | 14679698 ~ 14680027 (+) |
| G13391 | NA | other | downstream | 1163822 | 14700176 ~ 14700730 (+) |
